RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 METTL25Q8N6Q8 603 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 UXS1Q8NBZ7 420 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 RASSF5Q8WWW0 418 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 ECHDC3Q96DC8 303 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 DEFB126Q9BYW3 111 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 ARRDC1-AS1Q9H2J1 176 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 PELI2Q9HAT8 420 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 TM9SF3Q9HD45 589 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 CACNA1EQ15878 2313 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 SNX4O95219 450 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 ALPPP05187 535 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 RPS17P08708 135 aaKnown RBP10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 FUT4P22083 530 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 IMPA1P29218 277 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 C6orf141Q5SZD1 244 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 ALG1LQ6GMV1 187 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 ANKRD13BQ86YJ7 626 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 SLC15A3Q8IY34 581 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 C1GALT1C1Q96EU7 318 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 NECAB3Q96P71 396 aaPredicted RBP10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 FUNDC2Q9BWH2 189 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 KLHL1Q9NR64 748 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 P2RX2Q9UBL9 471 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 EMCNQ9ULC0 261 aa10.14□□□□□ -0.79
CARMIL3-202ENST00000559694 FABP3P05413 133 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 BMP2P12643 396 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 COL9A1P20849 921 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 ATP5A1P25705 553 aaKnown RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 KIAA1024LP59773 190 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 CDK6Q00534 326 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 DECR1Q16698 335 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 METRNLQ641Q3 311 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 GALNT10Q86SR1 603 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 IGFN1Q86VF2 1251 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 CACTIN-AS1Q8N1I8 211 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 CLIP4Q8N3C7 705 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 WDR83Q9BRX9 315 aaKnown RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 TAS2R9Q9NYW1 312 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 CCDC59Q9P031 241 aaKnown RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 MKL2Q9ULH7 1088 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 TESMINQ9Y4I5 508 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 PTPRFP10586 1907 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 A8MV72 311 aaPredicted RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 INMTO95050 263 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 OTX2P32243 289 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 OPRL1P41146 370 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 SLC19A1P41440 591 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 KCNAB2Q13303 367 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 ANGPT1Q15389 498 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 OR56A1Q8NGH5 318 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 HDAC2Q92769 488 aaKnown RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 DAZLQ92904 295 aaKnown RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 SLC38A4Q969I6 547 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 Q96MT0 163 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 NPLQ9BXD5 320 aaPredicted RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 C7orf72A4D263 438 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 MCIDASD6RGH6 385 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 H0YAE9 185 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 RDH16O75452 317 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 ACVR1Q04771 509 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 BCL7AQ4VC05 210 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 IFI44LQ53G44 452 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 NDUFAF5Q5TEU4 345 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 NKAIN2Q5VXU1 208 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 RNF130Q86XS8 419 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 FAM217AQ8IXS0 508 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 ZZZ3Q8IYH5 903 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 RNF175Q8N4F7 328 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 AGBL5Q8NDL9 886 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 ZNF740Q8NDX6 193 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 ARHGAP9Q9BRR9 750 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 SORBS1Q9BX66 1292 aaKnown RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 TTYH1Q9H313 450 aaPredicted RBP10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 WDR45Q9Y484 360 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 SPAG17Q6Q759 2223 aa10.13□□□□□ -0.79
CARMIL3-202ENST00000559694 K7EQS6 105 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 ZNF701M0R085 212 aaPredicted RBP10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 DFNA5O60443 496 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 CPNE3O75131 537 aaKnown RBP10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 SLCO2B1O94956 709 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 MATN1P21941 496 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 RTL4Q6ZR62 310 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 LILRA2Q8N149 483 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 ARL14Q8N4G2 192 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 AP3S1Q92572 193 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 FCGR1BQ92637 280 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 TFAP2CQ92754 450 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 LPAR4Q99677 370 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 AIG1Q9NVV5 245 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 PADI2Q9Y2J8 665 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 PCDHGA7Q9Y5G6 932 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 OR6C70A6NIJ9 312 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 TNFRSF11BO00300 401 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 AGR2O95994 175 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 YES1P07947 543 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 ZNF888P0CJ79 500 aaPredicted RBP10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 CERS1P27544 350 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 CDH12P55289 794 aa10.12□□□□□ -0.79
CARMIL3-202ENST00000559694 CD83Q01151 205 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms