RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 UQCRC1P31930 480 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 BSGP35613 385 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 TIMP3P35625 211 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 TRPC1P48995 793 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 GPX6P59796 221 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 CALCOCO2Q13137 446 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 DUSP8Q13202 625 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 SNTB1Q13884 538 aaKnown RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 ZNF267Q14586 743 aaPredicted RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 KBTBD12Q3ZCT8 623 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 GRTP1Q5TC63 336 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 LIPJQ5W064 366 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 POMZP3Q6PJE2 187 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 MAATS1Q7Z4T9 603 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 TBC1D1Q86TI0 1168 aaPredicted RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 TAGAPQ8N103 731 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 TNIP2Q8NFZ5 429 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 FAM222BQ8WU58 562 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 RIT1Q92963 219 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 RNASE6Q93091 150 aaKnown RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 LRRC46Q96FV0 321 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 JSRP1Q96MG2 331 aaPredicted RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 NAPGQ99747 312 aaPredicted RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 PRDM14Q9GZV8 571 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 UBQLN3Q9H347 655 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 DDX31Q9H8H2 851 aaKnown RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 PRM3Q9NNZ6 103 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 ZNF629Q9UEG4 869 aaPredicted RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 CBLCQ9ULV8 474 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 PCDHGA11Q9Y5H2 935 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 ATRQ13535 2644 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 SYCE1LA8MT33 242 aa12□□□□□ -0.49
TPM1-220ENST00000559556 CAPN14A8MX76 684 aa12□□□□□ -0.49
TPM1-220ENST00000559556 H0YIV9 168 aa12□□□□□ -0.49
TPM1-220ENST00000559556 TP53I11O14683 189 aa12□□□□□ -0.49
TPM1-220ENST00000559556 TMPRSS11DO60235 418 aa12□□□□□ -0.49
TPM1-220ENST00000559556 UGDHO60701 494 aa12□□□□□ -0.49
TPM1-220ENST00000559556 EEDO75530 441 aaKnown RBP12□□□□□ -0.49
TPM1-220ENST00000559556 HOXB4P17483 251 aaPredicted RBP12□□□□□ -0.49
TPM1-220ENST00000559556 DNASE1P24855 282 aa12□□□□□ -0.49
TPM1-220ENST00000559556 PTX3P26022 381 aaPredicted RBP12□□□□□ -0.49
TPM1-220ENST00000559556 CRABP2P29373 138 aa12□□□□□ -0.49
TPM1-220ENST00000559556 PAFAH1B1P43034 410 aa12□□□□□ -0.49
TPM1-220ENST00000559556 TMED10P49755 219 aaKnown RBP12□□□□□ -0.49
TPM1-220ENST00000559556 RPS13P62277 151 aaKnown RBP12□□□□□ -0.49
TPM1-220ENST00000559556 PPP2R2AP63151 447 aa12□□□□□ -0.49
TPM1-220ENST00000559556 PHEXP78562 749 aa12□□□□□ -0.49
TPM1-220ENST00000559556 CUL3Q13618 768 aa12□□□□□ -0.49
TPM1-220ENST00000559556 SLMAPQ14BN4 828 aa12□□□□□ -0.49
TPM1-220ENST00000559556 SETDB1Q15047 1291 aa12□□□□□ -0.49
TPM1-220ENST00000559556 FNDC7Q5VTL7 733 aa12□□□□□ -0.49
TPM1-220ENST00000559556 PAMR1Q6UXH9 720 aa12□□□□□ -0.49
TPM1-220ENST00000559556 C3orf62Q6ZUJ4 267 aa12□□□□□ -0.49
TPM1-220ENST00000559556 RAPH1Q70E73 1250 aa12□□□□□ -0.49
TPM1-220ENST00000559556 CDC20BQ86Y33 519 aa12□□□□□ -0.49
TPM1-220ENST00000559556 CTAGE3PQ8IX95 158 aa12□□□□□ -0.49
TPM1-220ENST00000559556 PM20D2Q8IYS1 436 aa12□□□□□ -0.49
TPM1-220ENST00000559556 CENPLQ8N0S6 344 aaPredicted RBP12□□□□□ -0.49
TPM1-220ENST00000559556 TEX9Q8N6V9 391 aa12□□□□□ -0.49
TPM1-220ENST00000559556 RHEBL1Q8TAI7 183 aa12□□□□□ -0.49
TPM1-220ENST00000559556 DOK4Q8TEW6 326 aa12□□□□□ -0.49
TPM1-220ENST00000559556 DIO2Q92813 273 aa12□□□□□ -0.49
TPM1-220ENST00000559556 TP53INP1Q96A56 240 aa12□□□□□ -0.49
TPM1-220ENST00000559556 MBD6Q96DN6 1003 aa12□□□□□ -0.49
TPM1-220ENST00000559556 HSPBAP1Q96EW2 488 aa12□□□□□ -0.49
TPM1-220ENST00000559556 RILPQ96NA2 401 aa12□□□□□ -0.49
TPM1-220ENST00000559556 SECISBP2Q96T21 854 aaKnown RBP12□□□□□ -0.49
TPM1-220ENST00000559556 TIMP4Q99727 224 aa12□□□□□ -0.49
TPM1-220ENST00000559556 ERP44Q9BS26 406 aa12□□□□□ -0.49
TPM1-220ENST00000559556 DPH5Q9H2P9 285 aa12□□□□□ -0.49
TPM1-220ENST00000559556 DLL4Q9NR61 685 aa12□□□□□ -0.49
TPM1-220ENST00000559556 SNX15Q9NRS6 342 aa12□□□□□ -0.49
TPM1-220ENST00000559556 GRHL1Q9NZI5 618 aa12□□□□□ -0.49
TPM1-220ENST00000559556 RNF14Q9UBS8 474 aa12□□□□□ -0.49
TPM1-220ENST00000559556 MTRF1LQ9UGC7 380 aaKnown RBP12□□□□□ -0.49
TPM1-220ENST00000559556 EDARQ9UNE0 448 aa12□□□□□ -0.49
TPM1-220ENST00000559556 PLEKHA6Q9Y2H5 1048 aa12□□□□□ -0.49
TPM1-220ENST00000559556 SONP18583 2426 aaKnown RBP12□□□□□ -0.49
TPM1-220ENST00000559556 HIVEP2P31629 2446 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 C15orf38-AP3S2A0A0A6YYH1 394 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 A0A1W2PR48 441 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 CCDC189A1A4V9 331 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 FAM187AA6NFU0 413 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 GLOD5A6NK44 160 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 FAM155BO75949 473 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 AIFM1O95831 613 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 HPNP05981 417 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 FAM58BPP0C7Q3 252 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 SLC35E2P0CK97 266 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 TACR1P25103 407 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 SSTR4P31391 388 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 CDK9P50750 372 aaKnown RBP11.99□□□□□ -0.49
TPM1-220ENST00000559556 ZNF136P52737 540 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 WNT3P56703 355 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 FBXW4P57775 412 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 GNG11P61952 73 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 FOXD4Q12950 439 aaPredicted RBP11.99□□□□□ -0.49
TPM1-220ENST00000559556 NAB1Q13506 487 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms