RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 LRRCC1Q9C099 1032 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 POLR1EQ9GZS1 481 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 RPAP3Q9H6T3 665 aaPredicted RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 DCTPP1Q9H773 170 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 GORASP2Q9H8Y8 452 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 SPHK2Q9NRA0 654 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 C1orf123Q9NWV4 160 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 RAI14Q9P0K7 980 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 KLK11Q9UBX7 282 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 MIOXQ9UGB7 285 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 FOXJ3Q9UPW0 622 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 WIPI2Q9Y4P8 454 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 COL3A1P02461 1466 aaPredicted RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 SMCHD1A6NHR9 2005 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 SF3B1O75533 1304 aaKnown RBP eCLIP2□□□□□ -2.09
GABPB1-209ENST00000559100 ZMYM6O95789 1325 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 A0A087WW49 117 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 LOC390937A0A1W2PQ73 354 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 EME2A4GXA9 379 aaPredicted RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 TRIM49BA6NDI0 452 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 SRRM4A7MD48 611 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 A8MU76 341 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 WASH3PC4AMC7 463 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 H3BMH7 237 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 BLOC1S5-TXNDC5H3BN57 136 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 UBXN8O00124 270 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 EI24O14681 340 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 XPO1O14980 1071 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 ARPC1BO15143 372 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 INSIG1O15503 277 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 BUB1O43683 1085 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 PCDH7O60245 1069 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 CSDE1O75534 798 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 MTRF1O75570 445 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 PALMO75781 387 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 TM7SF2O76062 418 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 ANGPTL1O95841 491 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 PAK4O96013 591 aaPredicted RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 OPN1MWP04001 364 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 FCER2P06734 321 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 SLC35G4P0C7Q5 338 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 ADORA3P0DMS8 318 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 OPN1MW2P0DN77 364 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 OPN1MW3P0DN78 364 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 UQCRBP14927 111 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 CD1DP15813 335 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 AOC1P19801 751 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 DRD5P21918 477 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 PSMA2P25787 234 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 PTPN6P29350 595 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 MMP12P39900 470 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 MTIF2P46199 727 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 HTR5AP47898 357 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 LEPRP48357 1165 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 SULT1E1P49888 294 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 SLC7A2P52569 658 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 LINC01547P58512 204 aaPredicted RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 ERVFC1-1P60608 527 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 RPL27P61353 136 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 PPIAP62937 165 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 GSTO1P78417 241 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 SPIBQ01892 262 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 MFGE8Q08431 387 aaPredicted RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 LRRC74AQ0VAA2 488 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 IL24Q13007 206 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 CHIT1Q13231 466 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 SRSF9Q13242 221 aaKnown RBP eCLIP2□□□□□ -2.09
GABPB1-209ENST00000559100 FHL1Q13642 323 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 EMC2Q15006 297 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 TEAD2Q15562 447 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 ZRSR1Q15695 479 aaKnown RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 HKDC1Q2TB90 917 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF672Q499Z4 452 aaPredicted RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 CCDC152Q4G0S7 254 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 BOLA3Q53S33 107 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 RABGAP1LQ5R372 815 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 CCDC183Q5T5S1 534 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 WLSQ5T9L3 541 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 ASPHD2Q6ICH7 369 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 SCYL2Q6P3W7 929 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 NIPAL3Q6P499 406 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 WASH2PQ6VEQ5 465 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 CENPUQ71F23 418 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 LRRC70Q7Z2Q7 622 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 ITIH5Q86UX2 942 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 VASH2Q86V25 355 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 FAM131BQ86XD5 332 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 TBC1D10CQ8IV04 446 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 SAMD14Q8IZD0 417 aaPredicted RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 SLC22A15Q8IZD6 547 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 RFLNBQ8N5W9 214 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF397Q8NF99 534 aaPredicted RBP2□□□□□ -2.09
GABPB1-209ENST00000559100 OR52B6Q8NGF0 335 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 OR52M1Q8NGK5 317 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 OR2T34Q8NGX1 318 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 OR6F1Q8NGZ6 308 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 OR52J3Q8NH60 311 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 C8orf46Q8TAG6 207 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 GATAD1Q8WUU5 269 aa2□□□□□ -2.09
GABPB1-209ENST00000559100 TADA1Q96BN2 335 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms