RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SLC30A7Q8NEW0 376 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 POC1BQ8TC44 478 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLC35F5Q8WV83 523 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLC38A3Q99624 504 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CCM2Q9BSQ5 444 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PCDHA9Q9Y5H5 950 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR6C6A6NF89 314 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CASTOR2A6NHX0 329 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 K7EPK0 472 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SHMT1P34896 483 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 FAM71E2Q8N5Q1 922 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 AGAP14A8MT82 685 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 INSIG1O15503 277 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 MMP7P09237 267 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 BACE1P56817 501 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ITPK1Q13572 414 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 FRG2Q64ET8 278 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 LIPIQ6XZB0 460 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR8J3Q8NGG0 315 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR10D4PQ8NGN7 298 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TIFAQ96CG3 184 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SAT2Q96F10 170 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 FRG2BQ96QU4 278 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLC19A3Q9BZV2 496 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 A0A1B0GVM2 712 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 LRIT2A6NDA9 550 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CDH11P55287 796 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ISL1P61371 349 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 AKR1C1Q04828 323 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ALKBH2Q6NS38 261 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 LARP4Q71RC2 724 aaKnown RBP eCLIP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 DVL3Q92997 716 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 POLR1EQ9GZS1 481 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NMNAT1Q9HAN9 279 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 KCNK12Q9HB15 430 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 FBXL21Q9UKT6 434 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 USP22Q9UPT9 525 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CNTNAP5Q8WYK1 1306 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RFTN2Q52LD8 501 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C18orf63Q68DL7 685 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF548Q8NEK5 533 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TSEN15Q8WW01 171 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 A0A1W2PQH9 124 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 FBXO45P0C2W1 286 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 HLA-EP13747 358 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 HOXD10P28358 340 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PPIGQ13427 754 aaKnown RBP eCLIP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 LASP1Q14847 261 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ABRAXAS2Q15018 415 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 GOLGA7Q7Z5G4 137 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 UEVLDQ8IX04 471 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PCDHB11Q9Y5F2 797 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 BEST1O76090 585 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SIRPB2Q5JXA9 342 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF836Q6ZNA1 936 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NXPE1Q8N323 547 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C2CD4CQ8TF44 421 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PSMG2Q969U7 264 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TMEM41AQ96HV5 264 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RFPL4AA6NLU0 287 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RFPL4AL1F8VTS6 287 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 GAAP10253 952 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF41P51814 821 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 HSF1Q00613 529 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 HTR4Q13639 388 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NADSYN1Q6IA69 706 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 LINC00471Q8N535 108 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 MFSD1Q9H3U5 465 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C1GALT1Q9NS00 363 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 GULP1Q9UBP9 304 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SNX11Q9Y5W9 270 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 GPR45Q9Y5Y3 372 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NUMBLQ9Y6R0 609 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 A3GALT2U3KPV4 340 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 IRS2Q9Y4H2 1338 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 A8MXE2 369 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CILPO75339 1184 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NCBP2P52298 156 aaKnown RBP eCLIP3.53□□□□□ -1.845e-7■■■■□ 25.1
ATXN3-248ENST00000558190 ACY1Q03154 408 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PHYHD1Q5SRE7 291 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 MBOAT1Q6ZNC8 495 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ARHGAP12Q8IWW6 846 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 BEND7Q8N7W2 519 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C2orf69Q8N8R5 385 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RELL2Q8NC24 303 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PROKR2Q8NFJ6 384 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SMPDL3BQ92485 455 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 F2RL3Q96RI0 385 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CMSS1Q9BQ75 279 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SEC22CQ9BRL7 303 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PRR14Q9BWN1 585 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TMEM184CQ9NVA4 438 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 GPR52Q9Y2T5 361 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TERTO14746 1132 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C9orf57Q5W0N0 161 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CD300LGQ6UXG3 332 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RBMS3Q6XE24 437 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 B3GLCTQ6Y288 498 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ZFPM2Q8WW38 1151 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C3orf30Q96M34 536 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms