RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SH3BP4Q9P0V3 963 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 RALYQ9UKM9 306 aaKnown RBP23.77■■□□□ 1.4
SMAD6-202ENST00000557916 GABRR3A8MPY1 467 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 MYO1GB0I1T2 1018 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 EDF1O60869 148 aaKnown RBP23.76■■□□□ 1.39
SMAD6-202ENST00000557916 TGDSO95455 350 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 CT62P0C5K7 136 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 PTGER1P34995 402 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 RPL3P39023 403 aaKnown RBP23.76■■□□□ 1.39
SMAD6-202ENST00000557916 PDE7AQ13946 482 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 PRICKLE4Q2TBC4 344 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 SPATA19Q7Z5L4 167 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 RPS19BP1Q86WX3 136 aaKnown RBP23.76■■□□□ 1.39
SMAD6-202ENST00000557916 KRTCAP2Q8N6L1 136 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 ADCY4Q8NFM4 1077 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 TM9SF4Q92544 642 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 BRINP2Q9C0B6 783 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 CDCP1Q9H5V8 836 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 EPS8L2Q9H6S3 715 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.76■■□□□ 1.39
SMAD6-202ENST00000557916 STMN3Q9NZ72 180 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 SCAMP2O15127 329 aaKnown RBP23.76■■□□□ 1.39
SMAD6-202ENST00000557916 PRKNO60260 465 aaPredicted RBP23.76■■□□□ 1.39
SMAD6-202ENST00000557916 PRPS1L1P21108 318 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 NTSP30990 170 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 CLDN8P56748 225 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 MGAT2Q10469 447 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 MAP4K2Q12851 820 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 LTB4RQ15722 352 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 MEP1AQ16819 746 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 ZNF385BQ569K4 471 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 ACER2Q5QJU3 275 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 FAM111BQ6SJ93 734 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 IGFL2Q6UWQ7 119 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 HPS6Q86YV9 775 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 VWA5B2Q8N398 1253 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 CEP70Q8NHQ1 597 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 SUN3Q8TAQ9 357 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 THAP3Q8WTV1 239 aaPredicted RBP23.76■■□□□ 1.39
SMAD6-202ENST00000557916 OR52B2Q96RD2 323 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 NPAS2Q99743 824 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 MAT2BQ9NZL9 334 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 ATP6V1HQ9UI12 483 aa23.76■■□□□ 1.39
SMAD6-202ENST00000557916 CROCCQ5TZA2 2017 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 FAM208BQ5VWN6 2430 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 BOD1L1Q8NFC6 3051 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 ALDOCP09972 364 aaKnown RBP23.75■■□□□ 1.39
SMAD6-202ENST00000557916 DDX5P17844 614 aaKnown RBP23.75■■□□□ 1.39
SMAD6-202ENST00000557916 SSTR4P31391 388 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 MDH1P40925 334 aaKnown RBP23.75■■□□□ 1.39
SMAD6-202ENST00000557916 NCBP2P52298 156 aaKnown RBP eCLIP23.75■■□□□ 1.39
SMAD6-202ENST00000557916 AQP5P55064 265 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 FUT7Q11130 342 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 SOWAHCQ53LP3 525 aaPredicted RBP23.75■■□□□ 1.39
SMAD6-202ENST00000557916 IGFL3Q6UXB1 125 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 RNF111Q6ZNA4 994 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 RIMKLAQ8IXN7 391 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 FAM9CQ8IZT9 166 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 LGI4Q8N135 537 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 OR7A2PQ8NGA2 310 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 OR9A2Q8NGT5 310 aa23.75■■□□□ 1.39
SMAD6-202ENST00000557916 TLN1Q9Y490 2541 aaKnown RBP23.74■■□□□ 1.39
SMAD6-202ENST00000557916 TNRC6AQ8NDV7 1962 aaKnown RBP23.74■■□□□ 1.39
SMAD6-202ENST00000557916 PDPK1O15530 556 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 MAN1A2O60476 641 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 DPM1O60762 260 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 SLC37A1P57057 533 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 RNF4P78317 190 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 ACAD11Q709F0 780 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 ZADH2Q8N4Q0 377 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 OR8K3Q8NH51 312 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 ZNF675Q8TD23 568 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 CIDECQ96AQ7 238 aaPredicted RBP23.74■■□□□ 1.39
SMAD6-202ENST00000557916 CTHRC1Q96CG8 243 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 PRPF18Q99633 342 aaKnown RBP23.74■■□□□ 1.39
SMAD6-202ENST00000557916 GLIPR2Q9H4G4 154 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 MAPRE3Q9UPY8 281 aa23.74■■□□□ 1.39
SMAD6-202ENST00000557916 CLPSP04118 112 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 S1PR1P21453 382 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 IDH3AP50213 366 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 MLF1P58340 268 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 C21orf58P58505 322 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 MRPS35P82673 323 aaKnown RBP23.73■■□□□ 1.39
SMAD6-202ENST00000557916 MPEG1Q2M385 716 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 LSM12Q3MHD2 195 aaKnown RBP23.73■■□□□ 1.39
SMAD6-202ENST00000557916 ZNF628Q5EBL2 1059 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 CPTPQ5TA50 214 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 C9orf40Q8IXQ3 194 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 BEST3Q8N1M1 668 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 ARMC10Q8N2F6 343 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 OR7G1Q8NGA0 311 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 OR5L2Q8NGL0 311 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 NUDT8Q8WV74 236 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 AMDHD1Q96NU7 426 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 DPY30Q9C005 99 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 OR10A5Q9H207 317 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 CCDC134Q9H6E4 229 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 SLAMF7Q9NQ25 335 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 AIG1Q9NVV5 245 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 PLA2G3Q9NZ20 509 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms