RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 C2orf92A0A1B0GVN3 265 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 LRRC3CA6NJW4 275 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 WASHC1A8K0Z3 465 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 CAPN14A8MX76 684 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 STX16-NPEPL1H3BU86 382 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 OR7A17O14581 309 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 STX16O14662 325 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 TP53I11O14683 189 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 KRT38O76015 456 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 URI1O94763 535 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-235ENST00000557740 TOXO94900 526 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 LRATO95237 230 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 IGFBP2P18065 325 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 SSTR4P31391 388 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 MAGEA12P43365 314 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 TMED10P49755 219 aaKnown RBP13.47□□□□□ -0.25
SHMT2-235ENST00000557740 KRTAP10-9P60411 292 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 TFF3Q07654 80 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 TRAF3Q13114 568 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 C1orf185Q5T7R7 199 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 RELL1Q8IUW5 271 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 LIX1Q8N485 282 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 ISL2Q96A47 359 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 ZNF597Q96LX8 424 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-235ENST00000557740 NSUN5Q96P11 429 aaKnown RBP13.47□□□□□ -0.25
SHMT2-235ENST00000557740 FMO2Q99518 471 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 NTMT1Q9BV86 223 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 CDC42EP4Q9H3Q1 356 aaKnown RBP13.47□□□□□ -0.25
SHMT2-235ENST00000557740 ELOVL6Q9H5J4 265 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 CXorf21Q9HAI6 301 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 ZNF358Q9NW07 568 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 ALKBH4Q9NXW9 302 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 AHSPQ9NZD4 102 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 DCHS2Q6V1P9 2916 aa13.47□□□□□ -0.25
SHMT2-235ENST00000557740 FAM47E-STBD1D6RA91 191 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 KLK1P06870 262 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 HOXD4P09016 255 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-235ENST00000557740 RFPL3SP0C7P2 107 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 GLI4P10075 376 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 GABRA1P14867 456 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 ZFP36L2P47974 494 aaKnown RBP13.46□□□□□ -0.25
SHMT2-235ENST00000557740 NRG3P56975 720 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 RPS6KA2Q15349 733 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 NTRK2Q16620 822 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 SGO1Q5FBB7 561 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 TBCELQ5QJ74 424 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 CCNYL2Q5T2Q4 361 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 CLYBLQ8N0X4 340 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 LRRC25Q8N386 305 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-235ENST00000557740 OR4K14Q8NGD5 310 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 IFT81Q8WYA0 676 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 DIO2Q92813 273 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 FUT8Q9BYC5 575 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 MRPL1Q9BYD6 325 aaKnown RBP13.46□□□□□ -0.25
SHMT2-235ENST00000557740 SLC6A15Q9H2J7 730 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 SLC24A3Q9HC58 644 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 QPCTLQ9NXS2 382 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 SPRR3Q9UBC9 169 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 ADAM29Q9UKF5 820 aa13.46□□□□□ -0.25
SHMT2-235ENST00000557740 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.25
SHMT2-235ENST00000557740 TACC2O95359 2948 aa13.46□□□□□ -0.26
SHMT2-235ENST00000557740 A0A0G2JNJ9 132 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 A0A1W2PS29 197 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 TRIM49D1C9J1S8 452 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 PGRMC2O15173 223 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 GUCY1B2O75343 617 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 OTCP00480 354 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 CLPSP04118 112 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 COL6A2P12110 1019 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 KRT15P19012 456 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 POU3F2P20265 443 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-235ENST00000557740 ENDOUP21128 410 aaKnown RBP13.45□□□□□ -0.26
SHMT2-235ENST00000557740 NT5EP21589 574 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 CNTFP26441 200 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 GDF1P27539 372 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 TRPC1P48995 793 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 XKP51811 444 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 MAPK12P53778 367 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 RPP38P78345 283 aaKnown RBP13.45□□□□□ -0.26
SHMT2-235ENST00000557740 MYBPHQ13203 477 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 GGTA1PQ4G0N0 100 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 TMEM198Q66K66 360 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 RTL6Q6ICC9 239 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 TMEM64Q6YI46 380 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 COMMD6Q7Z4G1 85 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 MILR1Q7Z6M3 343 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 DMRTC2Q8IXT2 367 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-235ENST00000557740 ZNF441Q8N8Z8 693 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 MNS1Q8NEH6 495 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 MYRIPQ8NFW9 859 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 UCN3Q969E3 161 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 MRPL57Q9BQC6 102 aaKnown RBP13.45□□□□□ -0.26
SHMT2-235ENST00000557740 ZNF559Q9BR84 538 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 MRPL46Q9H2W6 279 aaKnown RBP13.45□□□□□ -0.26
SHMT2-235ENST00000557740 ZBTB26Q9HCK0 441 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 ACKR4Q9NPB9 350 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 Q9UFV3 132 aa13.45□□□□□ -0.26
SHMT2-235ENST00000557740 SLC12A4Q9UP95 1085 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms