RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 METTL27Q8N6F8 245 aaPredicted RBP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 HORMAD2Q8N7B1 307 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 TRIML2Q8N7C3 387 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 PLD5Q8N7P1 536 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 TTC29Q8NA56 475 aaPredicted RBP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 PDPRQ8NCN5 879 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 DDHD1Q8NEL9 900 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 OR2L2Q8NH16 312 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 ARRDC2Q8TBH0 407 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 FAM222BQ8WU58 562 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 Q96MF0 132 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 SIGLEC12Q96PQ1 595 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 PEBP4Q96S96 227 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 PRPF18Q99633 342 aaKnown RBP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 CPNE1Q99829 537 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 CCT7Q99832 543 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 UTP23Q9BRU9 249 aaKnown RBP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 MENTQ9BUN1 341 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 HES7Q9BYE0 225 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 ANKRD60Q9BZ19 345 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 EFCAB1Q9HAE3 211 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 CLK4Q9HAZ1 481 aaKnown RBP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 MAGEE1Q9HCI5 957 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 TCF7L2Q9NQB0 619 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 TBC1D23Q9NUY8 699 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 RBM22Q9NW64 420 aaKnown RBP eCLIP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 RHBDL2Q9NX52 303 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 MARCOQ9UEW3 520 aaPredicted RBP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 FAF1Q9UNN5 650 aaPredicted RBP6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 RAP2CQ9Y3L5 183 aa6.38□□□□□ -1.39
SPTLC2-206ENST00000557566 ZNF407Q9C0G0 2248 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 A0A1B0GTH9 108 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ANKRD34BA5PLL1 514 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 H3BSA7 217 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 IFRD1O00458 451 aaPredicted RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 HDAC3O15379 428 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 SUSD5O60279 629 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 E2F6O75461 281 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ALDOAP04075 364 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 HLA-DQB2P05538 268 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 PIRTP0C851 137 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 KITP10721 976 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 NAT2P11245 290 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CD53P19397 219 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 MSH3P20585 1137 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 PIK3R1P27986 724 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 SLC7A1P30825 629 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 AKT1P31749 480 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 SPRP35270 261 aaPredicted RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 GP5P40197 560 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CD86P42081 329 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ZFP36L2P47974 494 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 EMP2P54851 167 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CSE1LP55060 971 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 DYNLT1P63172 113 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 BMPR2Q13873 1038 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 SNTB1Q13884 538 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 LRRC36Q1X8D7 754 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 FAM214AQ32MH5 1076 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 SLC25A35Q3KQZ1 300 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CCDC92Q53HC0 331 aaPredicted RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 TCTE1Q5JU00 501 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ACER2Q5QJU3 275 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CATSPEREQ5SY80 951 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 SFRP5Q5T4F7 317 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ZDHHC20Q5W0Z9 365 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 LRRC8BQ6P9F7 803 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 KDELC1Q6UW63 502 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CYP4V2Q6ZWL3 525 aaPredicted RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ZNF534Q76KX8 674 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CFAP206Q8IYR0 622 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 LRRC75A-AS1Q8N1F1 130 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 RPRMLQ8N4K4 120 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 POU5F2Q8N7G0 328 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ANKFN1Q8N957 763 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 MINDY2Q8NBR6 621 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 OR5M3Q8NGP4 307 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 OR10Q1Q8NGQ4 319 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CEP70Q8NHQ1 597 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 PNPT1Q8TCS8 783 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CCDC124Q96CT7 223 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ASB9Q96DX5 294 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ZNF354BQ96LW1 612 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CNBD2Q96M20 576 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 QKIQ96PU8 341 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 OR2A14Q96R47 310 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 NRTNQ99748 197 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 TUBA1CQ9BQE3 449 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 HGH1Q9BTY7 390 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 IL22Q9GZX6 179 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 XKR8Q9H6D3 395 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 MVB12BQ9H7P6 319 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 COG4Q9H9E3 785 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 ZNF304Q9HCX3 659 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 DDX18Q9NVP1 670 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 PNPOQ9NVS9 261 aa6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 SAE1Q9UBE0 346 aaPredicted RBP6.37□□□□□ -1.39
SPTLC2-206ENST00000557566 CBLCQ9ULV8 474 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms