RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CASP3P42574 277 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 SCTRP47872 440 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 ARFIP2P53365 341 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 IRF9Q00978 393 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 ACVR1Q04771 509 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 GPS1Q13098 491 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 FGFBP1Q14512 234 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 CTU2Q2VPK5 515 aaKnown RBP8.4□□□□□ -1.06
NEDD1-211ENST00000557454 IQCCQ4KMZ1 466 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 OXLD1Q5BKU9 147 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 MBOAT1Q6ZNC8 495 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 CHMP1BQ7LBR1 199 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 STRA8Q7Z7C7 330 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 ANKRD53Q8N9V6 530 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 S100PBPQ96BU1 408 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 RHBDF1Q96CC6 855 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 SENP5Q96HI0 755 aaPredicted RBP8.4□□□□□ -1.06
NEDD1-211ENST00000557454 BIRC8Q96P09 236 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 RNF122Q9H9V4 155 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 DDX56Q9NY93 547 aaKnown RBP8.4□□□□□ -1.06
NEDD1-211ENST00000557454 LCMT1Q9UIC8 334 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 PTBP2Q9UKA9 531 aaKnown RBP8.4□□□□□ -1.06
NEDD1-211ENST00000557454 HYOU1Q9Y4L1 999 aa8.4□□□□□ -1.06
NEDD1-211ENST00000557454 PLCE1Q9P212 2302 aa8.4□□□□□ -1.07
NEDD1-211ENST00000557454 hCG_1818297A0A087WSY0 165 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 LOC100653049A0A140TA62 436 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 LRP5LA4QPB2 252 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 PABPN1LA6NDY0 278 aaKnown RBP8.39□□□□□ -1.07
NEDD1-211ENST00000557454 DPRXA6NFQ7 191 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 CYR61O00622 381 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 CD3EAPO15446 510 aaKnown RBP8.39□□□□□ -1.07
NEDD1-211ENST00000557454 CTNSO60931 367 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 LDB3O75112 727 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 NDUFS3O75489 264 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 KRT34O76011 436 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 ZNF23P17027 643 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 TCEA1P23193 301 aaKnown RBP8.39□□□□□ -1.07
NEDD1-211ENST00000557454 PDLIM4P50479 330 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 EFNA4P52798 201 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 KIF5AQ12840 1032 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 FOXL1Q12952 345 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 NAE1Q13564 534 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 CUL1Q13616 776 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 TAB1Q15750 504 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 CARTPTQ16568 116 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 LRRC38Q5VT99 294 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 ALKBH5Q6P6C2 394 aaKnown RBP8.39□□□□□ -1.07
NEDD1-211ENST00000557454 AAGABQ6PD74 315 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 USP43Q70EL4 1123 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 FAM214BQ7L5A3 538 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 VASH1Q7L8A9 365 aaPredicted RBP8.39□□□□□ -1.07
NEDD1-211ENST00000557454 APTXQ7Z2E3 356 aaKnown RBP8.39□□□□□ -1.07
NEDD1-211ENST00000557454 UBQLNLQ8IYU4 475 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 TBC1D19Q8N5T2 526 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 PLPP7Q8NBV4 271 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 ABHD11Q8NFV4 315 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 OR4K1Q8NGD4 311 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 FNDC9Q8TBE3 224 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 DOK4Q8TEW6 326 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 KCTD4Q8WVF5 259 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 ASB11Q8WXH4 323 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 SFXN2Q96NB2 322 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 FAM118BQ9BPY3 351 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 PACSIN1Q9BY11 444 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 WWTR1Q9GZV5 400 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 UNKLQ9H9P5 680 aaKnown RBP8.39□□□□□ -1.07
NEDD1-211ENST00000557454 CBLN4Q9NTU7 201 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 WWOXQ9NZC7 414 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 GPR52Q9Y2T5 361 aa8.39□□□□□ -1.07
NEDD1-211ENST00000557454 MACROD2A1Z1Q3 448 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 H0YC42 278 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 H7C417 338 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 ZBTB14O43829 449 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 METTL18O95568 372 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 NPPBP16860 134 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 PSMB1P20618 241 aaKnown RBP8.38□□□□□ -1.07
NEDD1-211ENST00000557454 IL2RGP31785 369 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 TTKP33981 857 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 AHRP35869 848 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 TPD52P55327 224 aaPredicted RBP8.38□□□□□ -1.07
NEDD1-211ENST00000557454 EBPQ15125 230 aaKnown RBP8.38□□□□□ -1.07
NEDD1-211ENST00000557454 TSC22D1Q15714 1073 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 TRIM40Q6P9F5 258 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 AGTRAPQ6RW13 159 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 LCTLQ6UWM7 567 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 ZNF793Q6ZN11 406 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 UBE2R2Q712K3 238 aaPredicted RBP8.38□□□□□ -1.07
NEDD1-211ENST00000557454 SLC29A4Q7RTT9 530 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 CDKL3Q8IVW4 592 aaPredicted RBP8.38□□□□□ -1.07
NEDD1-211ENST00000557454 RCOR2Q8IZ40 523 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 TAGAPQ8N103 731 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 SVOPLQ8N434 492 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 PRELID2Q8N945 189 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 FBF1Q8TES7 1133 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 FAR2Q96K12 515 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 NPLQ9BXD5 320 aaPredicted RBP8.38□□□□□ -1.07
NEDD1-211ENST00000557454 PINK1Q9BXM7 581 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 OR10A4Q9H209 315 aa8.38□□□□□ -1.07
NEDD1-211ENST00000557454 ACTR8Q9H981 624 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms