RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CLCN2P51788 898 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 PLIN5Q00G26 463 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 DUSP2Q05923 314 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 MEP1AQ16819 746 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 SPRED3Q2MJR0 410 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 RFTN2Q52LD8 501 aaPredicted RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 ZNF468Q5VIY5 522 aaPredicted RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 ABHD17BQ5VST6 288 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 ZNF227Q86WZ6 799 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 BEST3Q8N1M1 668 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 SLC5A8Q8N695 610 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 OR8K3Q8NH51 312 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 PPP1R14CQ8TAE6 165 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 AGR3Q8TD06 166 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 DOK4Q8TEW6 326 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 CNRIP1Q96F85 164 aaPredicted RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 FBXL20Q96IG2 436 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 CCT7Q99832 543 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 PAIP2Q9BPZ3 127 aaKnown RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 PELOQ9BRX2 385 aaKnown RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 FAIM2Q9BWQ8 316 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 EBPLQ9BY08 206 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 DEFB126Q9BYW3 111 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 ILKAPQ9H0C8 392 aaPredicted RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 EPN3Q9H201 632 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 CDCP1Q9H5V8 836 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 EPS8L2Q9H6S3 715 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 TRIM45Q9H8W5 580 aaPredicted RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 CXorf21Q9HAI6 301 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 MYNNQ9NPC7 610 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 TAS2R7Q9NYW3 318 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 TEKT2Q9UIF3 430 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 FIS1Q9Y3D6 152 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 RAP2CQ9Y3L5 183 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 POLEQ07864 2286 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 GNG14A0A1W2PPG7 69 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 SEC22BO75396 215 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 HSPA4LO95757 839 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 CHEK2O96017 543 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 ATP1B1P05026 303 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 CT62P0C5K7 136 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 PORP16435 677 aaPredicted RBP8.96□□□□□ -0.98
SRP54-210ENST00000556380 CSNK2A2P19784 350 aaPredicted RBP8.96□□□□□ -0.98
SRP54-210ENST00000556380 DDCP20711 480 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 PIK3R1P27986 724 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 TRHRP34981 398 aaPredicted RBP8.96□□□□□ -0.98
SRP54-210ENST00000556380 CD96P40200 585 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 RPL14P50914 215 aaKnown RBP8.96□□□□□ -0.98
SRP54-210ENST00000556380 ZNF763Q0D2J5 394 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 FUT7Q11130 342 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 MAP4K2Q12851 820 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 TUBA3CQ13748 450 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 HEPACAMQ14CZ8 416 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 TLR1Q15399 786 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 CEBPEQ15744 281 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 TUBA3EQ6PEY2 450 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 HSDL2Q6YN16 418 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 C16orf47Q6ZP98 133 aaPredicted RBP8.96□□□□□ -0.98
SRP54-210ENST00000556380 DDIASQ8IXT1 998 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 ZNF615Q8N8J6 731 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 RAB3IL1Q8TBN0 382 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 MGARPQ8TDB4 240 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 RIT1Q92963 219 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 CTHRC1Q96CG8 243 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 EGLN2Q96KS0 407 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 BARD1Q99728 777 aaKnown RBP8.96□□□□□ -0.98
SRP54-210ENST00000556380 OR8D2Q9GZM6 311 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 SLC35C2Q9NQQ7 365 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 PNPOQ9NVS9 261 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 NKIRAS1Q9NYS0 192 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 EHD3Q9NZN3 535 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 GIMAP2Q9UG22 337 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 ZNF639Q9UID6 485 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 PSME2Q9UL46 239 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 TMED5Q9Y3A6 229 aa8.96□□□□□ -0.98
SRP54-210ENST00000556380 POLR3HQ9Y535 204 aaPredicted RBP8.96□□□□□ -0.98
SRP54-210ENST00000556380 ATP6AP2A0A1C7CYW4 349 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 DYTNA2CJ06 578 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 OR5H15A6NDH6 313 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 GABRR3A8MPY1 467 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 MYO1GB0I1T2 1018 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 HMGB1P1B2RPK0 211 aaPredicted RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 KLF11O14901 512 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 OR10H2O60403 315 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 ZNF354AO60765 605 aaPredicted RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 TBX19O60806 448 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 ATP6AP2O75787 350 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 NEURL1O76050 574 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 F10P00742 488 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 BCKDHAP12694 445 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 COX7A2P14406 83 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 PLA2G2AP14555 144 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 SDC1P18827 310 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 FEN1P39748 380 aaKnown RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 ST13P50502 369 aaKnown RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 HK2P52789 917 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 MLLT10P55197 1068 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 SLC37A1P57057 533 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 ERVK-8P63133 956 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 RNF4P78317 190 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms