RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ANGPTL8Q6UXH0 198 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 LINGO4Q6UY18 593 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 Q6ZSR9 355 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 NCCRP1Q6ZVX7 275 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TUBA1AQ71U36 451 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 DET1Q7L5Y6 550 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 GALNT5Q7Z7M9 940 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ZBTB46Q86UZ6 589 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PIANPQ8IYJ0 282 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PNPLA1Q8N8W4 532 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TTC29Q8NA56 475 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SMRP1Q8NCR6 262 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 GPR156Q8NFN8 814 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ABHD11Q8NFV4 315 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CLHC1Q8NHS4 586 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 MCFD2Q8NI22 146 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 C9orf43Q8TAL5 461 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CNIH3Q8TBE1 160 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PHF10Q8WUB8 498 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ATL1Q8WXF7 558 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 USP7Q93009 1102 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TESCQ96BS2 214 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 RHBDF1Q96CC6 855 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 REPS1Q96D71 796 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ZHX1-C8orf76Q96EF9 292 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 MSLNLQ96KJ4 702 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 FOPNLQ96NB1 174 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF583Q96ND8 569 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TSSK3Q96PN8 268 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 NTMT1Q9BV86 223 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ITPAQ9BY32 194 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TM6SF2Q9BZW4 377 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 NTN4Q9HB63 628 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 THUMPD1Q9NXG2 353 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PDP1Q9P0J1 537 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 IL17CQ9P0M4 197 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 VPS51Q9UID3 782 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SLC25A13Q9UJS0 675 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 INTS6Q9UL03 887 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 VPS4AQ9UN37 437 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 RUVBL1Q9Y265 456 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 POFUT2Q9Y2G5 429 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 MED16Q9Y2X0 877 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 NAALAD2Q9Y3Q0 740 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 YIPF1Q9Y548 306 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PCDHGA8Q9Y5G5 932 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 HEMK1Q9Y5R4 338 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 U3KQV3 271 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 IGF2RP11717 2491 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ASPMQ8IZT6 3477 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CEP295Q9C0D2 2601 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF840PA6NDX5 716 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 MGAT4DA6NG13 374 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 TRIM64BA6NI03 449 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 hCG_2039718K7EN88 272 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 UPK1AO00322 258 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PLK4O00444 970 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ANKRD28O15084 1053 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 LINC01565O15544 149 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 B4GAT1O43505 415 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ASNA1O43681 348 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 AIREO43918 545 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SH3BP5O60239 455 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 UGDHO60701 494 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PROP1O75360 226 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 BCAS1O75363 584 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 JRKO75564 520 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 INMTO95050 263 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 LRATO95237 230 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CPSF4O95639 269 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PTTG1O95997 202 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PDYNP01213 254 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 IFNA14P01570 189 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 TRBC1P01850 177 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 MT-ND2P03891 347 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CATP04040 527 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 RPLP0P05388 317 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 UGT2B4P06133 528 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ALPIP09923 528 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CYP2A6P11509 494 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 HSD3B1P14060 373 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CD36P16671 472 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SDC1P18827 310 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ATF6P18850 670 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 AGXTP21549 392 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ENPP1P22413 925 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PRPH2P23942 346 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 HSD3B2P26439 372 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CD40LGP29965 261 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FMO3P31513 532 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CA8P35219 290 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PCGF2P35227 344 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 IDUAP35475 653 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SOAT1P35610 550 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PIGAP37287 484 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 MPLP40238 635 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 RECQLP46063 649 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 NEK2P51955 445 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 IST1P53990 364 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 RPS3AP61247 264 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms