RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 FRMPD2BQ6IN97 320 aa14.08□□□□□ -0.15
NEK9-209ENST00000556170 LHFPL3Q86UP9 236 aa14.08□□□□□ -0.15
NEK9-209ENST00000556170 TMEFF1Q8IYR6 380 aa14.08□□□□□ -0.15
NEK9-209ENST00000556170 C19orf18Q8NEA5 215 aa14.08□□□□□ -0.15
NEK9-209ENST00000556170 GGHQ92820 318 aa14.08□□□□□ -0.15
NEK9-209ENST00000556170 TSSK6Q9BXA6 273 aa14.08□□□□□ -0.15
NEK9-209ENST00000556170 AGAP14A8MT82 685 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 BTN3A3O00478 584 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 KIAA0513O60268 411 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 MPZL2O60487 215 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 KLF8O95600 359 aaPredicted RBP14.08□□□□□ -0.16
NEK9-209ENST00000556170 ITGAMP11215 1152 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 CD72P21854 359 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 CSTF2P33240 577 aaKnown RBP eCLIP14.08□□□□□ -0.16
NEK9-209ENST00000556170 ZNF57Q68EA5 555 aaPredicted RBP14.08□□□□□ -0.16
NEK9-209ENST00000556170 CALHM3Q86XJ0 350 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 DEFB119Q8N690 84 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 TMIEQ8NEW7 156 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 OR52L1Q8NGH7 329 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 LRR1Q96L50 414 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 SLC7A5P2Q9GIP4 190 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 RNF167Q9H6Y7 350 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 SOHLH2Q9NX45 425 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 GPR34Q9UPC5 381 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 CKAP5Q14008 2032 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 SOX3P41225 446 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 RPS21P63220 83 aaKnown RBP14.08□□□□□ -0.16
NEK9-209ENST00000556170 KCNJ10P78508 379 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 CTBSQ01459 385 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 AQP6Q13520 282 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 LARS2Q15031 903 aaKnown RBP14.08□□□□□ -0.16
NEK9-209ENST00000556170 TMPRSS11AQ6ZMR5 421 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 SYNPOQ8N3V7 929 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 OR52E1Q8NGJ3 308 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 RNFT2Q96EX2 444 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 C16orf58Q96GQ5 468 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 EPYCQ99645 322 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 TREX2Q9BQ50 279 aaPredicted RBP14.08□□□□□ -0.16
NEK9-209ENST00000556170 HDHD2Q9H0R4 259 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 CNIH4Q9P003 139 aa14.08□□□□□ -0.16
NEK9-209ENST00000556170 LAMA2P24043 3122 aaKnown RBP14.08□□□□□ -0.16
NEK9-209ENST00000556170 URADA6NGE7 173 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 OTOL1A6NHN0 477 aaPredicted RBP14.07□□□□□ -0.16
NEK9-209ENST00000556170 HNRNPCL2B2RXH8 293 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 ENTPD6O75354 484 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 IL1RNP18510 177 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 MC3RP41968 323 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 ZNF33BQ06732 778 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 PRRT3Q5FWE3 981 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 COX18Q8N8Q8 333 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 NUP43Q8NFH3 380 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 PIGXQ8TBF5 258 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 GRHL3Q8TE85 626 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 DHRS1Q96LJ7 313 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 TTTY10Q9BZA0 68 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 SNAP47Q5SQN1 464 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 MLIPQ5VWP3 458 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 TRIQKQ629K1 86 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 LCTLQ6UWM7 567 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 PRR23CQ6ZRP0 262 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 PRSS58Q8IYP2 241 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 ACOT4Q8N9L9 421 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 TTLQ8NG68 377 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 TIGARQ9NQ88 270 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 TAAR2Q9P1P5 351 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 CDH7Q9ULB5 785 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 PPIL1Q9Y3C6 166 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 WDR45Q9Y484 360 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 CDRT1O95170 752 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 CHMP24386 653 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 LIPAP38571 399 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 NNATQ16517 81 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 FAM71E1Q6IPT2 247 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 POMZP3Q6PJE2 187 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 DCDC5Q6ZRR9 648 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 OR9A2Q8NGT5 310 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 ARSGQ96EG1 525 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 ASPNQ9BXN1 380 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 SFXN1Q9H9B4 322 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 KRCC1Q9NPI7 259 aaPredicted RBP14.07□□□□□ -0.16
NEK9-209ENST00000556170 ERVK13-1Q9NX77 482 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 SAGE1Q9NXZ1 904 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 FOXE1O00358 373 aaPredicted RBP14.07□□□□□ -0.16
NEK9-209ENST00000556170 PTHP01270 115 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 RPL4P36578 427 aaKnown RBP14.07□□□□□ -0.16
NEK9-209ENST00000556170 SLC35A2P78381 396 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 RAE1P78406 368 aaKnown RBP14.07□□□□□ -0.16
NEK9-209ENST00000556170 XAF1Q6GPH4 301 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 RNF44Q7L0R7 432 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 ANKRD13BQ86YJ7 626 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 SPATA9Q9BWV2 254 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 DSN1Q9H410 356 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 SNX7Q9UNH6 387 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 PCDHGA2Q9Y5H1 932 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 HSPE1-MOB4S4R3N1 261 aa14.07□□□□□ -0.16
NEK9-209ENST00000556170 ZNF236Q9UL36 1845 aa14.06□□□□□ -0.16
NEK9-209ENST00000556170 DOCK4Q8N1I0 1966 aa14.06□□□□□ -0.16
NEK9-209ENST00000556170 FUOMA2VDF0 154 aa14.06□□□□□ -0.16
NEK9-209ENST00000556170 LCMT2O60294 686 aaKnown RBP14.06□□□□□ -0.16
NEK9-209ENST00000556170 ARAFP10398 606 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms