RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 GEMIN6Q8WXD5 167 aaKnown RBP13.84□□□□□ -0.19
VPS33B-205ENST00000556096 PIGKQ92643 395 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 RAB8BQ92930 207 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 EPYCQ99645 322 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 MAP3K3Q99759 626 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 REEP1Q9H902 201 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 TMEM74BQ9NUR3 256 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 NDUFAF4Q9P032 175 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 NAALAD2Q9Y3Q0 740 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 PCDHGB3Q9Y5G1 929 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 U3KQV3 271 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 PI4KAP42356 2102 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 A0A1W2PS29 197 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 RHPN2P1A8MT19 583 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 HCRTR1O43613 425 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 SDC3O75056 442 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 GNAO1P09471 354 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 OR12D1P0DN82 309 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 CTSKP43235 329 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 PPP1R8Q12972 351 aaKnown RBP13.84□□□□□ -0.19
VPS33B-205ENST00000556096 GNA13Q14344 377 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 TTC23Q5W5X9 447 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 TMEM107Q6UX40 140 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 PRSS41Q7RTY9 318 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 CA13Q8N1Q1 262 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 NUP43Q8NFH3 380 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 OR9A2Q8NGT5 310 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 RASSF5Q8WWW0 418 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF285Q96NJ3 590 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF607Q96SK3 696 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 CSF3RQ99062 836 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 CD180Q99467 661 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 FSCN3Q9NQT6 498 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 C3orf18Q9UK00 162 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 ADAMTS9Q9P2N4 1935 aa13.83□□□□□ -0.19
VPS33B-205ENST00000556096 GOLGA4Q13439 2230 aaKnown RBP13.83□□□□□ -0.2
VPS33B-205ENST00000556096 A0A1B0GTW7 788 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 A0A1B0GVT2 93 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 TLCD2A6NGC4 264 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 CYR61O00622 381 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 ADAMDEC1O15204 470 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 ASNA1O43681 348 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 DIRAS1O95057 198 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 MFN2O95140 757 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 H6PDO95479 791 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 HMGN2P05204 90 aaKnown RBP13.83□□□□□ -0.2
VPS33B-205ENST00000556096 ALPPL2P10696 532 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 PRKACGP22612 351 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 PPP2R1BP30154 601 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 PRKAG1P54619 331 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 SIM1P81133 766 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-205ENST00000556096 C6orf132Q5T0Z8 1188 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 PRAMEF8Q5VWM4 474 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 PRAMEF7Q5VXH5 474 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 NIPAL1Q6NVV3 410 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 SZRD1Q7Z422 152 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 LGI4Q8N135 537 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 XAGE5Q8WWM1 108 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 TANKQ92844 425 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 MAGED4Q96JG8 741 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 ZC3H10Q96K80 434 aaKnown RBP13.83□□□□□ -0.2
VPS33B-205ENST00000556096 ZNF300Q96RE9 604 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-205ENST00000556096 TOR3AQ9H497 397 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 RUBCNLQ9H714 662 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 ANKHQ9HCJ1 492 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 BCL2L10Q9HD36 194 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 TRPC4Q9UBN4 977 aa13.83□□□□□ -0.2
VPS33B-205ENST00000556096 SAMHD1Q9Y3Z3 626 aaKnown RBP13.83□□□□□ -0.2
VPS33B-205ENST00000556096 FRYLO94915 3013 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 PRAMEF27A3QJZ7 478 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 H3BNH8 94 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 NUDT21O43809 227 aaKnown RBP13.82□□□□□ -0.2
VPS33B-205ENST00000556096 SLC28A2O43868 658 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 C9P02748 559 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 IFI6P09912 130 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 SMIM18P0DKX4 95 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 NR2F1P10589 423 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 PORP16435 677 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-205ENST00000556096 CD247P20963 164 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 MC3RP41968 323 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 GABRA4P48169 554 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 RAD23AP54725 363 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 RAB38P57729 211 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 OLR1P78380 273 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 KCNC4Q03721 635 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 CACNA1EQ15878 2313 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 NDUFA9Q16795 377 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 ZIK1Q3SY52 487 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-205ENST00000556096 FAM92BQ6ZTR7 304 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 CARFQ8N187 725 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 SUMF1Q8NBK3 374 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 OR5D16Q8NGK9 328 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 BBS10Q8TAM1 723 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 ZDHHC12Q96GR4 267 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 FBXL20Q96IG2 436 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 IRF2BPLQ9H1B7 796 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 ARRDC1-AS1Q9H2J1 176 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 EPB41L1Q9H4G0 881 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 STARD5Q9NSY2 213 aa13.82□□□□□ -0.2
VPS33B-205ENST00000556096 FAM118AQ9NWS6 357 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms