RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TRBV23OR9-2A0A075B6M9 112 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 A0A0J9YY10 115 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 OR5K3A6NET4 321 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 EIF4E1BA6NMX2 242 aaKnown RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 C4orf51C9J302 202 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 PGRMC2O15173 223 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 B4GALT2O60909 372 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CTSVO60911 334 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 NDUFS2O75306 463 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 E2F6O75461 281 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 PDE9AO76083 593 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 BMP10O95393 424 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 AIFM1O95831 613 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 C9P02748 559 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 GNAO1P09471 354 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 SLC35G6P0C7Q6 338 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 ITGAMP11215 1152 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 POLR2CP19387 275 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CSNK2A2P19784 350 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 MAGP20916 626 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF10P21506 573 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CD38P28907 300 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 NTSP30990 170 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 RYKP34925 604 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 MPIP34949 423 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 FASLGP48023 281 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 HMGA2P52926 109 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 IST1P53990 364 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 RAD23AP54725 363 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 VLDLRP98155 873 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 GNA13Q14344 377 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 ELOCQ15369 112 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 SPDYE7PQ495Y7 208 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 IFI44LQ53G44 452 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 PRAMEF8Q5VWM4 474 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 PRAMEF7Q5VXH5 474 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 KDM4DQ6B0I6 523 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 FAHD1Q6P587 224 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 KLHL35Q6PF15 583 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 BORAQ6PGQ7 559 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 TTC33Q6PID6 262 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CEACAM20Q6UY09 585 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 RNF44Q7L0R7 432 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 TSEN54Q7Z6J9 526 aaKnown RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 VTCN1Q7Z7D3 282 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 TMEM179BQ7Z7N9 219 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 C17orf82Q86X59 251 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 KRTAP1-3Q8IUG1 177 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 TSPAN14Q8NG11 270 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 NFKBIDQ8NI38 313 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 SLC38A5Q8WUX1 472 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CYGBQ8WWM9 190 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 JPH3Q8WXH2 748 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 EXOSC8Q96B26 276 aaKnown RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 RMND5BQ96G75 393 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF681Q96N22 645 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 SLC6A18Q96N87 628 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 BBS4Q96RK4 519 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CDX2Q99626 313 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 IER2Q9BTL4 223 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 TCEAL2Q9H3H9 227 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CXorf56Q9H5V9 222 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CAAP1Q9H8G2 361 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 REEP1Q9H902 201 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 SYNPO2LQ9H987 977 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 LYRM4Q9HD34 91 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 BCL2L10Q9HD36 194 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 GIMAP4Q9NUV9 329 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 DDX18Q9NVP1 670 aaKnown RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 HRASLS2Q9NWW9 162 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 NDUFAF4Q9P032 175 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 TMEFF2Q9UIK5 374 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-235ENST00000556082 ACSL6Q9UKU0 697 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 ABCG2Q9UNQ0 655 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 KLHL20Q9Y2M5 609 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 SNX8Q9Y5X2 465 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 SLC22A7Q9Y694 548 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 HSPE1-MOB4S4R3N1 261 aa7.82□□□□□ -1.16
ATXN3-235ENST00000556082 CROCCQ5TZA2 2017 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 LAMA3Q16787 3333 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 A0A087WXM4 84 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 E9PQ18 207 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 TLR4O00206 839 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 HMGN4O00479 90 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 ADAMDEC1O15204 470 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 ASNA1O43681 348 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 UGT2B11O75310 529 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 JRKO75564 520 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 MFN2O95140 757 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 PGM3O95394 542 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 WNT1P04628 370 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 FHP07954 510 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF888P0CJ79 500 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-235ENST00000556082 CERS1P27544 350 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 HOXA6P31267 233 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 SOAT1P35610 550 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 ALDH3B2P48448 385 aa7.81□□□□□ -1.16
ATXN3-235ENST00000556082 PXNP49023 591 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms