RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 FEN1P39748 380 aaKnown RBP12.7□□□□□ -0.38
SHMT2-219ENST00000555563 KCNK10P57789 538 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 GPR85P60893 370 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 MPEG1Q2M385 716 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 TNFAIP8L3Q5GJ75 292 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 C6orf163Q5TEZ5 329 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 IL20RBQ6UXL0 311 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 SLC29A4Q7RTT9 530 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 EXOC3L1Q86VI1 746 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 VWA5B2Q8N398 1253 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 CPSF7Q8N684 471 aaKnown RBP12.7□□□□□ -0.38
SHMT2-219ENST00000555563 PSD4Q8NDX1 1056 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 OR2T11Q8NH01 316 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 CDC26Q8NHZ8 85 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 PKNOX2Q96KN3 472 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 ZNF681Q96N22 645 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 WWTR1Q9GZV5 400 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 TSPAN10Q9H1Z9 355 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-219ENST00000555563 TUBB1Q9H4B7 451 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 SSU72Q9NP77 194 aaKnown RBP12.7□□□□□ -0.38
SHMT2-219ENST00000555563 UTS2RQ9UKP6 389 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 DNAJC15Q9Y5T4 150 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 RELNP78509 3460 aa12.7□□□□□ -0.38
SHMT2-219ENST00000555563 OR6C76A6NM76 312 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 CTIFO43310 598 aaKnown RBP12.69□□□□□ -0.38
SHMT2-219ENST00000555563 ERLIN1O75477 346 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 WISP2O76076 250 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 NADKO95544 446 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-219ENST00000555563 DRD2P14416 443 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 PRPH2P23942 346 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 SOX18P35713 384 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 GSTM5P46439 218 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 SERPINB4P48594 390 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 MEOX1P50221 254 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 ALDH6A1Q02252 535 aaKnown RBP12.69□□□□□ -0.38
SHMT2-219ENST00000555563 FUT7Q11130 342 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 ESPL1Q14674 2120 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 HEPACAMQ14CZ8 416 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 LTB4RQ15722 352 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 PRICKLE4Q2TBC4 344 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 SH2D4BQ5SQS7 431 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 CES4AQ5XG92 561 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 OPN5Q6U736 354 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 LRIG3Q6UXM1 1119 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 RTL4Q6ZR62 310 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 RNF165Q6ZSG1 346 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 SULF2Q8IWU5 870 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 LRRC25Q8N386 305 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-219ENST00000555563 SLC22A8Q8TCC7 542 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 AGR3Q8TD06 166 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 EXOSC8Q96B26 276 aaKnown RBP12.69□□□□□ -0.38
SHMT2-219ENST00000555563 PGM2Q96G03 612 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 BRINP2Q9C0B6 783 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 LRTM1Q9HBL6 345 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 TIMMDC1Q9NPL8 285 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 PFDN4Q9NQP4 134 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 DEPPQ9NTK1 212 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 MAT2BQ9NZL9 334 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 PSME2Q9UL46 239 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 ZNF780BQ9Y6R6 833 aa12.69□□□□□ -0.38
SHMT2-219ENST00000555563 A0A0G2JMM0 328 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 A0A1W2PPB8 328 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 A0A1W2PRS3 328 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 KIR3DP1A8MWS1 328 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 NPIPB8E9PQR5 432 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 SLC28A1O00337 649 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 TM9SF1O15321 606 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 RGS14O43566 566 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 PEX1O43933 1283 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 UNC5CO95185 931 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 CHEK2O96017 543 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 LINC00032P0C843 101 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 RNF224P0DH78 156 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 NEFHP12036 1026 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 GP1BBP13224 206 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 ZNF24P17028 368 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 SERPINB5P36952 375 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 RFC3P40938 356 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 MGAT2Q10469 447 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 DUSP8Q13202 625 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 PIGGQ5H8A4 983 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 BEND6Q5SZJ8 279 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-219ENST00000555563 NOXRED1Q6NXP6 359 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 FAM111BQ6SJ93 734 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 LYPD8Q6UX82 237 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 GFRALQ6UXV0 394 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 CROCCP2Q86T23 111 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 DDIASQ8IXT1 998 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 ZNF615Q8N8J6 731 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 ZNF441Q8N8Z8 693 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 GOLM1Q8NBJ4 401 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 ADCY4Q8NFM4 1077 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 OR6Y1Q8NGX8 325 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 FAM76AQ8TAV0 307 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 TWIST2Q8WVJ9 160 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 OR10A5Q9H207 317 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 EML4Q9HC35 981 aaKnown RBP12.68□□□□□ -0.38
SHMT2-219ENST00000555563 MYNNQ9NPC7 610 aa12.68□□□□□ -0.38
SHMT2-219ENST00000555563 C1orf109Q9NX04 203 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms