RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 TIA1P31483 386 aaKnown RBP eCLIP18.96■□□□□ 0.63
VTI1B-205ENST00000555543 FEN1P39748 380 aaKnown RBP18.96■□□□□ 0.63
VTI1B-205ENST00000555543 ALDH9A1P49189 494 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 TRA2BP62995 288 aaKnown RBP18.96■□□□□ 0.63
VTI1B-205ENST00000555543 BTKQ06187 659 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 SPIN4Q56A73 249 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 CLEC6AQ6EIG7 209 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 LYPD8Q6UX82 237 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 KLHL29Q96CT2 875 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 MECRQ9BV79 373 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 TMEM109Q9BVC6 243 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 EBPLQ9BY08 206 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.96■□□□□ 0.63
VTI1B-205ENST00000555543 DLGAP4Q9Y2H0 992 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 GNG14A0A1W2PPG7 69 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 G3V3Y1 287 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 KLRC4-KLRK1H3BQV0 150 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 ZNHIT1O43257 154 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 NT5EP21589 574 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 ALDH3A1P30838 453 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 SOX18P35713 384 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 HSF1Q00613 529 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF844Q08AG5 666 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 FUT7Q11130 342 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 GALNT18Q6P9A2 607 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 OPN5Q6U736 354 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 SLC29A4Q7RTT9 530 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF441Q8N8Z8 693 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 ZFP62Q8NB50 900 aaPredicted RBP18.95■□□□□ 0.62
VTI1B-205ENST00000555543 CNRIP1Q96F85 164 aaPredicted RBP18.95■□□□□ 0.62
VTI1B-205ENST00000555543 FAIM2Q9BWQ8 316 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 PTGDR2Q9Y5Y4 395 aa18.95■□□□□ 0.62
VTI1B-205ENST00000555543 A1L4Q6 167 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 GOLGA6L10A6NI86 522 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 OR6C76A6NM76 312 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 H3BQF6 201 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 ASNA1O43681 348 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 TRIM13O60858 407 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 CRCPO75575 148 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 CCL3P10147 92 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 S1PR1P21453 382 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 MGAT2Q10469 447 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF791Q3KP31 576 aaPredicted RBP18.94■□□□□ 0.62
VTI1B-205ENST00000555543 SPDYAQ5MJ70 313 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 RTL4Q6ZR62 310 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 TRIM46Q7Z4K8 759 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 FJX1Q86VR8 437 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 CHERPQ8IWX8 916 aaKnown RBP18.94■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF615Q8N8J6 731 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 POGLUT1Q8NBL1 392 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 SLC22A8Q8TCC7 542 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 TCP10LQ8TDR4 215 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 C16orf78Q8WTQ4 265 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF681Q96N22 645 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 MAT2BQ9NZL9 334 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 CROCCQ5TZA2 2017 aa18.94■□□□□ 0.62
VTI1B-205ENST00000555543 DIDO1Q9BTC0 2240 aaKnown RBP18.94■□□□□ 0.62
VTI1B-205ENST00000555543 ATP1B1P05026 303 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 CHRNGP07510 517 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 UROSP10746 265 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 DUSP8Q13202 625 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 LTB4RQ15722 352 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 PRICKLE4Q2TBC4 344 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 KRT71Q3SY84 523 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 KRTCAP3Q53RY4 240 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 FAM111BQ6SJ93 734 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 VWA5B2Q8N398 1253 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 GOLM1Q8NBJ4 401 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 SIMC1Q8NDZ2 872 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 ADCY4Q8NFM4 1077 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 OR2M7Q8NG81 312 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 C16orf52Q8NHV5 167 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 SMC6Q96SB8 1091 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 OR10A5Q9H207 317 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 SH2D2AQ9NP31 389 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 SIRT5Q9NXA8 310 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 UTS2RQ9UKP6 389 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 DTX4Q9Y2E6 619 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 CCL27Q9Y4X3 112 aa18.93■□□□□ 0.62
VTI1B-205ENST00000555543 TRGV8A0A0C4DH27 118 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 TFECO14948 347 aaPredicted RBP18.92■□□□□ 0.62
VTI1B-205ENST00000555543 TYROBPO43914 113 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 HS6ST1O60243 411 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 SLC19A2O60779 497 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 ANXA4P09525 319 aaPredicted RBP18.92■□□□□ 0.62
VTI1B-205ENST00000555543 GP1BBP13224 206 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 CSNK2A2P19784 350 aaPredicted RBP18.92■□□□□ 0.62
VTI1B-205ENST00000555543 NR0B1P51843 470 aaKnown RBP18.92■□□□□ 0.62
VTI1B-205ENST00000555543 EXOSC7Q15024 291 aaKnown RBP18.92■□□□□ 0.62
VTI1B-205ENST00000555543 IMPG1Q17R60 797 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 CMPK2Q5EBM0 449 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 C6orf163Q5TEZ5 329 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 HIST2H2BCQ6DN03 193 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 TMEM64Q6YI46 380 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 ZCCHC23Q6ZST2 131 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 FGD2Q7Z6J4 655 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 RELTQ969Z4 430 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 SPACA9Q96E40 222 aaPredicted RBP18.92■□□□□ 0.62
VTI1B-205ENST00000555543 SGCZQ96LD1 299 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 TRMOQ9BU70 441 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms