RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ESX1Q8N693 406 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ATP6V1C2Q8NEY4 427 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 OR52J3Q8NH60 311 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 OTUB2Q96DC9 234 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 OMA1Q96E52 524 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 TCF25Q9BQ70 676 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 TMEM43Q9BTV4 400 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 RNF208Q9H0X6 261 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 EPHX3Q9H6B9 360 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 SPHK2Q9NRA0 654 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 MRPS18AQ9NVS2 196 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 WDR70Q9NW82 654 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ATP6V1HQ9UI12 483 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 HCN2Q9UL51 889 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 NDRG2Q9UN36 371 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ANGPT4Q9Y264 503 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 KCNE2Q9Y6J6 123 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 HELZP42694 1942 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 TMEM129A0AVI4 362 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 ARHGEF33A8MVX0 844 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 PCDH17O14917 1159 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 PLD2O14939 933 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 PCDH7O60245 1069 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 IFNW1P05000 195 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 TYRP14679 529 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 TIMP2P16035 220 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 GSTM5P46439 218 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 PRLHRP49683 370 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 PER3P56645 1201 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 PCBP3P57721 371 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 EEF1A2Q05639 463 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 RGS1Q08116 209 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 GAB1Q13480 694 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 DOC2AQ14183 400 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 DOC2BQ14184 412 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 KLHL22Q53GT1 634 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 C3orf38Q5JPI3 329 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 KIAA1211LQ6NV74 962 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 PAMR1Q6UXH9 720 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 QSOX2Q6ZRP7 698 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 LAPTM4BQ86VI4 370 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 KIF18BQ86Y91 864 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 FAM26EQ8N5C1 309 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 FBXO15Q8NCQ5 510 aaPredicted RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 OR56A3Q8NH54 315 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 GTPBP3Q969Y2 492 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 TEFMQ96QE5 360 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 RIOK2Q9BVS4 552 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 EBPLQ9BY08 206 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 SMG9Q9H0W8 520 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 SGK2Q9HBY8 427 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 EMC7Q9NPA0 242 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 MCUBQ9NWR8 336 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 MARK1Q9P0L2 795 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 STOX2Q9P2F5 926 aaPredicted RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 MBD1Q9UIS9 605 aaPredicted RBP10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 SNX11Q9Y5W9 270 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 STON1Q9Y6Q2 735 aa10.15□□□□□ -0.78
MTHFD1-210ENST00000555252 SLC5A10A0PJK1 596 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TUBAL3A6NHL2 446 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SNTNA6NMZ2 147 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 GABRR3A8MPY1 467 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF197O14709 1029 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 YY2O15391 372 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CCL16O15467 120 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC19A2O60779 497 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 LEFTY1O75610 366 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 GASTP01350 101 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CLTBP09497 229 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 ARAFP10398 606 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 NR2F6P10588 404 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 NAGAP17050 411 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 IDSP22304 550 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 AQP1P29972 269 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 PTGS2P35354 604 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TALDO1P37837 337 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SRP54P61011 504 aaKnown RBP10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CDK6Q00534 326 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 NAE1Q13564 534 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 DSG2Q14126 1118 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 HEPACAMQ14CZ8 416 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF805Q5CZA5 627 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 HACD4Q5VWC8 232 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 LIPKQ5VXJ0 399 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CD200R1LQ6Q8B3 271 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 Q6ZVL8 140 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TECPR1Q7Z6L1 1165 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TMCO2Q7Z6W1 182 aaPredicted RBP10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 GPALPP1Q8IXQ4 340 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TP53I13Q8NBR0 393 aaPredicted RBP10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TOR1AIP2Q8NFQ8 470 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SCAMP4Q969E2 229 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 GLYATL1Q969I3 302 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 MAL2Q969L2 176 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 ZBED6CLQ96FA7 236 aaPredicted RBP10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 C17orf62Q9BQA9 187 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 KATNB1Q9BVA0 655 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TSSK6Q9BXA6 273 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms