RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PRRG2O14669 202 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 AZIN1O14977 448 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 CDC40O60508 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF354AO60765 605 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 OR6B1O95007 311 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 SIX3O95343 332 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 ESRRBO95718 433 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 TPOP07202 933 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 KITP10721 976 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 NCF1P14598 390 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 IGFBP2P18065 325 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 GNAZP19086 355 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 EPORP19235 508 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 SSTR2P30874 369 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 PTGS2P35354 604 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 IDH3AP50213 366 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 PLA2G16P53816 162 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 HNRNPH2P55795 449 aaKnown RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 STXBP1P61764 594 aaKnown RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 TFF3Q07654 80 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 TESK1Q15569 626 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 TMIGD1Q6UXZ0 262 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 RNF165Q6ZSG1 346 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 ACAD11Q709F0 780 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 LRRC70Q7Z2Q7 622 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 FITM2Q8N6M3 262 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF321PQ8N8H1 164 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 ESAMQ96AP7 390 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 C14orf79Q96F83 325 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 THOC1Q96FV9 657 aaKnown RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 MAELQ96JY0 434 aaKnown RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 SPOCK3Q9BQ16 436 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 NPLQ9BXD5 320 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 CD244Q9BZW8 370 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 MYLK2Q9H1R3 596 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 ADAP2Q9NPF8 381 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 WWOXQ9NZC7 414 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 KCMF1Q9P0J7 381 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 MARCOQ9UEW3 520 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF490Q9ULM2 529 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 TRIM33Q9UPN9 1127 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 TRAF6Q9Y4K3 522 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 ARHGAP21Q5T5U3 1957 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 MTORP42345 2549 aa9.81□□□□□ -0.84
SHMT2-215ENST00000554656 FREM3P0C091 2139 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 GOLGA8QA0A0J9YX86 632 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 GOLGA8OA6NCC3 632 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 GOLGA8NF8WBI6 632 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 G3V3Y1 287 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 KLRC4-KLRK1H3BQV0 150 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 K7EPI3 171 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 SLC22A2O15244 555 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 B3GALT2O43825 422 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 CLEC3AO75596 197 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 STK16O75716 305 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 OR2J2O76002 312 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 PDE9AO76083 593 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 OTCP00480 354 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 ENO1P06733 434 aaKnown RBP9.8□□□□□ -0.84
SHMT2-215ENST00000554656 SERPINB3P29508 390 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 ADSLP30566 484 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-215ENST00000554656 SOX3P41225 446 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 HSPA7P48741 367 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 SSR4P51571 173 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 LIM2P55344 173 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 HSD17B7P56937 341 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 BNIP1Q12981 228 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 SLC13A2Q13183 592 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 KRT72Q14CN4 511 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 ABHD17CQ6PCB6 329 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 MEX3BQ6ZN04 569 aaKnown RBP9.8□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF793Q6ZN11 406 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 MAVSQ7Z434 540 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 UBE3DQ7Z6J8 389 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 TMEM156Q8N614 296 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 PSD4Q8NDX1 1056 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 TTLQ8NG68 377 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 OR2L5Q8NG80 312 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 ACTRT2Q8TDY3 377 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 PTPMT1Q8WUK0 201 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-215ENST00000554656 RILPQ96NA2 401 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 F2RL3Q96RI0 385 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 NTMT1Q9BV86 223 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 NT5DC2Q9H857 520 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 MEAF6Q9HAF1 191 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 ZBTB26Q9HCK0 441 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 TCF7L2Q9NQB0 619 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 PRDM7Q9NQW5 492 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 OPTCQ9UBM4 332 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 ITGB1BP2Q9UKP3 347 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 DAPP1Q9UN19 280 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 LIPGQ9Y5X9 500 aa9.8□□□□□ -0.84
SHMT2-215ENST00000554656 NKX2-6A6NCS4 301 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 FAM166BA8MTA8 275 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 WWP2O00308 870 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 SDHDO14521 159 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 UBFD1O14562 309 aaKnown RBP9.79□□□□□ -0.84
SHMT2-215ENST00000554656 UBOX5O94941 541 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 CHEK2O96017 543 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms