RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MCOLN3Q8TDD5 553 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 GRHL3Q8TE85 626 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 MITD1Q8WV92 249 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 GTF3AQ92664 365 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 MARC2Q969Z3 335 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 FAM46BQ96A09 425 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ELMOD3Q96FG2 381 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PLPPR2Q96GM1 343 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TMEM176AQ96HP8 235 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 LRIG1Q96JA1 1093 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SERAC1Q96JX3 654 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZIM3Q96PE6 472 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TECTBQ96PL2 329 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ACOX2Q99424 681 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 NAT9Q9BTE0 207 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 GTPBP2Q9BX10 602 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 GSDMCQ9BYG8 508 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 MAGEB5Q9BZ81 275 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 C6orf62Q9GZU0 229 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 KCNN2Q9H2S1 579 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SMYD3Q9H7B4 428 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 IPPKQ9H8X2 491 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 RNPEPL1Q9HAU8 725 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CCNB1IP1Q9NPC3 277 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PRSS16Q9NQE7 514 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 FAM118AQ9NWS6 357 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 RDH8Q9NYR8 311 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PLA2G3Q9NZ20 509 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 NCKIPSDQ9NZQ3 722 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 FTSJ1Q9UET6 329 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 FBXL17Q9UF56 701 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CGGBP1Q9UFW8 167 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 SERGEFQ9UGK8 458 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 RALYQ9UKM9 306 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 UTS2RQ9UKP6 389 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 AGO1Q9UL18 857 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 SHOC2Q9UQ13 582 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 EIF3LQ9Y262 564 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 SLC5A6Q9Y289 635 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 VWA7Q9Y334 891 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 COQ4Q9Y3A0 265 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF175Q9Y473 711 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 WDR87Q6ZQQ6 2873 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CHD8Q9HCK8 2581 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CACNA1GO43497 2377 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 TPRP12270 2363 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 A0A0A6YYK5 440 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 FAM230AA0A1W2PPH8 454 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 NPIPB13A6NJU9 1138 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ERI2A8K979 691 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 A8MUI8 341 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MIF4GDA9UHW6 222 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 NPIPB4C9JG80 1138 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 TMEM238C9JI98 176 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 NEDD8-MDP1E9PL57 170 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 AIM2O14862 343 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 BCKDKO14874 412 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 LIN7AO14910 233 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 UGDHO60701 494 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CNTN5O94779 1100 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KDM4BO94953 1096 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 WDR47O94967 919 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KRT75O95678 551 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 LDOC1O95751 146 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 SEMA4FO95754 770 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 IFNA6P05013 189 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RPS17P08708 135 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 INHBBP09529 407 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 C8orf89P0DMQ9 161 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RARAP10276 462 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SLC2A3P11169 496 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 B4GALT1P15291 398 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 NPPBP16860 134 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ZNF7P17097 686 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 GOT1P17174 413 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GSTM2P28161 218 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 BDKRB2P30411 391 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PKLRP30613 574 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RORAP35398 523 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RASSF2P50749 326 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PRPS1P60891 318 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CSHL1Q14406 222 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 HLXQ14774 488 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 ETFDHQ16134 617 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 IFI16Q16666 785 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 TMEM44Q2T9K0 475 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ZNF699Q32M78 642 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 IQCCQ4KMZ1 466 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KLHL22Q53GT1 634 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KLHL26Q53HC5 615 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RABGAP1LQ5R372 815 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SLC22A10Q63ZE4 541 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 NAPEPLDQ6IQ20 393 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 AADACL2Q6P093 401 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 WDR59Q6PJI9 974 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CRTC3Q6UUV7 619 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 NHLRC1Q6VVB1 395 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 TMEM26Q6ZUK4 368 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 APTXQ7Z2E3 356 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 GPRIN1Q7Z2K8 1008 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms