RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 TKTL1P51854 596 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 TMEM50BP56557 158 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 ABCE1P61221 599 aaKnown RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 RPL27P61353 136 aaKnown RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 PMP22Q01453 160 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 MFGE8Q08431 387 aaPredicted RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 KIAA0141Q14154 515 aaPredicted RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 FASTKD3Q14CZ7 662 aaKnown RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 OR1C1Q15619 314 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 MLF2Q15773 248 aaPredicted RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 TRIM65Q6PJ69 517 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 MCM10Q7L590 875 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 TMEM185AQ8NFB2 350 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 OR10G7Q8NGN6 311 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 TNFRSF13CQ96RJ3 184 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 S1PR3Q99500 378 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 FUNDC2Q9BWH2 189 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 WDR41Q9HAD4 459 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 SYTL2Q9HCH5 934 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 ANO10Q9NW15 660 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 ERRFI1Q9UJM3 462 aaPredicted RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 MRTO4Q9UKD2 239 aaKnown RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 NUDCQ9Y266 331 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 RGPD3A6NKT7 1758 aaPredicted RBP4.26□□□□□ -1.73
CHD8-207ENST00000554384 RGPD4Q7Z3J3 1758 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 PEAK1Q9H792 1746 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 NRXN1Q9ULB1 1477 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 H7C423 109 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 INPP4BO15327 924 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 MTRF1O75570 445 aaKnown RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 SORBS2O94875 1100 aaKnown RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 OR6A2O95222 327 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ZNF883P0CG24 379 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ZCCHC18P0CG32 403 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ZNF10P21506 573 aaPredicted RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 UGT1A4P22310 534 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 STIP1P31948 543 aaKnown RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 MTIF2P46199 727 aaKnown RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 LIMK2P53671 638 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 GEMP55040 296 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 CD300CQ08708 224 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ENPP2Q13822 863 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 LY6DQ14210 128 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 GCKRQ14397 625 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 PDK1Q15118 436 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 RFTN2Q52LD8 501 aaPredicted RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 MYOM3Q5VTT5 1437 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 PDE4DIPQ5VU43 2346 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ISLR2Q6UXK2 745 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 WDR88Q6ZMY6 472 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ITIH5Q86UX2 942 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ZFAND4Q86XD8 727 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 PARP8Q8N3A8 854 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 OR8H1Q8NGG4 311 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 C8orf46Q8TAG6 207 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 EXOC6Q8TAG9 804 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 GTF3AQ92664 365 aaKnown RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 ESAMQ96AP7 390 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 SLCO4A1Q96BD0 722 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 MOCOSQ96EN8 888 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 PKP2Q99959 881 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 PINK1Q9BXM7 581 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 TEX13AQ9BXU3 409 aaPredicted RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 XPO4Q9C0E2 1151 aaKnown RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 GFRA4Q9GZZ7 299 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 PARLQ9H300 379 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 MARCH7Q9H992 704 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 GDF3Q9NR23 364 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ZDHHC18Q9NUE0 388 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 NDE1Q9NXR1 346 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 FAM153AQ9UHL3 310 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ZNF346Q9UL40 294 aaKnown RBP4.25□□□□□ -1.73
CHD8-207ENST00000554384 CNTNAP1P78357 1384 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 ANKRD30AQ9BXX3 1397 aa4.25□□□□□ -1.73
CHD8-207ENST00000554384 UMODL1Q5DID0 1318 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 RPGRIP1LQ68CZ1 1315 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 TRBV5-4A0A0C4DH59 114 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 A0A0U1RRA0 63 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 LOC390937A0A1W2PQ73 354 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 TFECO14948 347 aaPredicted RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 HSF2BPO75031 334 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 LRP3O75074 770 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 ANXA9O76027 345 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 GAS8-AS1O95177 125 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 MT3P25713 68 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 NSFP46459 744 aaKnown RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 LUMP51884 338 aaPredicted RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 NDUFV3P56181 108 aaKnown RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 PPP1R8Q12972 351 aaKnown RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 ZNF146Q15072 292 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 TAF1BQ53T94 588 aaPredicted RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 DOK6Q6PKX4 331 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 ADGRD2Q7Z7M1 963 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 PRSS33Q8NF86 280 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 KIAA1524Q8TCG1 905 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 MIPOL1Q8TD10 442 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 GPR137Q96N19 417 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 ALKBH3Q96Q83 286 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms