RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 LIX1Q8N485 282 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 PTGR2Q8N8N7 351 aaPredicted RBP17.26■□□□□ 0.35
CPSF2-203ENST00000554290 NEIL3Q8TAT5 605 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 TP53INP1Q96A56 240 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 LRRC1Q9BTT6 524 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 AHSPQ9NZD4 102 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 MTRF1LQ9UGC7 380 aaKnown RBP17.26■□□□□ 0.35
CPSF2-203ENST00000554290 ZNF407Q9C0G0 2248 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 POLQO75417 2590 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 TEP1Q99973 2627 aaKnown RBP17.25■□□□□ 0.35
CPSF2-203ENST00000554290 A0A0G2JNJ9 132 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 ANKRD33BA6NCL7 494 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 LRRC3CA6NJW4 275 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 OR7A17O14581 309 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 PGRMC2O15173 223 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 TMED10P49755 219 aaKnown RBP17.25■□□□□ 0.35
CPSF2-203ENST00000554290 C6orf163Q5TEZ5 329 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 FRG2Q64ET8 278 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 PAGE2Q7Z2X7 111 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 GALNT12Q8IXK2 581 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 C17orf53Q8N3J3 647 aaPredicted RBP17.25■□□□□ 0.35
CPSF2-203ENST00000554290 OR4K14Q8NGD5 310 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 DIO2Q92813 273 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 PHF21BQ96EK2 531 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 ZNF597Q96LX8 424 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 CDK15Q96Q40 435 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 FRG2BQ96QU4 278 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 NTMT1Q9BV86 223 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 TSPYL1Q9H0U9 437 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 CXorf21Q9HAI6 301 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 PROK2Q9HC23 129 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 NINJ2Q9NZG7 142 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 SPRR3Q9UBC9 169 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 Q9UFV3 132 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 CNOT11Q9UKZ1 510 aaKnown RBP17.25■□□□□ 0.35
CPSF2-203ENST00000554290 IKBKGQ9Y6K9 419 aa17.25■□□□□ 0.35
CPSF2-203ENST00000554290 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
CPSF2-203ENST00000554290 STX16-NPEPL1H3BU86 382 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 STX16O14662 325 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 SMIM24O75264 130 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 CLPSP04118 112 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 INHBAP08476 426 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 ENDOUP21128 410 aaKnown RBP17.24■□□□□ 0.35
CPSF2-203ENST00000554290 SSTR4P31391 388 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 NRG3P56975 720 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 RIPPLY3P57055 190 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 IFT88Q13099 833 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 RPS6KA2Q15349 733 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 TESK1Q15569 626 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 TSNAXIP1Q2TAA8 658 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 SLC25A35Q3KQZ1 300 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 RIPPLY2Q5TAB7 128 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 SPNS3Q6ZMD2 512 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 TAOK1Q7L7X3 1001 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 TMEM200AQ86VY9 491 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 PLD6Q8N2A8 252 aaKnown RBP17.24■□□□□ 0.35
CPSF2-203ENST00000554290 OR52B6Q8NGF0 335 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 UCN3Q969E3 161 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 TEX10Q9NXF1 929 aaPredicted RBP17.24■□□□□ 0.35
CPSF2-203ENST00000554290 ADAM29Q9UKF5 820 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 PCTPQ9UKL6 214 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 NPFFR2Q9Y5X5 522 aa17.24■□□□□ 0.35
CPSF2-203ENST00000554290 PHF3Q92576 2039 aaKnown RBP17.24■□□□□ 0.35
CPSF2-203ENST00000554290 GUCY1B2O75343 617 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 SNX4O95219 450 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 LRATO95237 230 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 KLK1P06870 262 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 COL6A2P12110 1019 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 GDF1P27539 372 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 ADH7P40394 386 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 TRPC1P48995 793 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 SERPINB9P50453 376 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 XKP51811 444 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 RPP38P78345 283 aaKnown RBP17.23■□□□□ 0.35
CPSF2-203ENST00000554290 FUT7Q11130 342 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 CCNYL2Q5T2Q4 361 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 RELL1Q8IUW5 271 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 ULK2Q8IYT8 1036 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 ZNF441Q8N8Z8 693 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 SLC44A1Q8WWI5 657 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 SECISBP2Q96T21 854 aaKnown RBP17.23■□□□□ 0.35
CPSF2-203ENST00000554290 SLC6A15Q9H2J7 730 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 ZNF358Q9NW07 568 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 CCDC168Q8NDH2 2452 aa17.23■□□□□ 0.35
CPSF2-203ENST00000554290 HCFC1P51610 2035 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 HSPB2A8KAH6 182 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 TRIM3O75382 744 aaPredicted RBP17.22■□□□□ 0.35
CPSF2-203ENST00000554290 ZWINTO95229 277 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 PORP16435 677 aaPredicted RBP17.22■□□□□ 0.35
CPSF2-203ENST00000554290 HSPB2Q16082 182 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 TMEM64Q6YI46 380 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 WDR53Q7Z5U6 358 aaPredicted RBP17.22■□□□□ 0.35
CPSF2-203ENST00000554290 MILR1Q7Z6M3 343 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 PACS2Q86VP3 889 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 LIX1LQ8IVB5 337 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 OR7G1Q8NGA0 311 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 TRPC4APQ8TEL6 797 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 FUT8Q9BYC5 575 aa17.22■□□□□ 0.35
CPSF2-203ENST00000554290 MRPL1Q9BYD6 325 aaKnown RBP17.22■□□□□ 0.35
CPSF2-203ENST00000554290 OR10A5Q9H207 317 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms