RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 APCDD1LQ8NCL9 501 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 NFAM1Q8NET5 270 aaPredicted RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 C16orf52Q8NHV5 167 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 GAL3ST3Q96A11 431 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ISL2Q96A47 359 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 CERS2Q96G23 380 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 NMUR2Q9GZQ4 415 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 EXO5Q9H790 373 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 COPS7BQ9H9Q2 264 aaPredicted RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 LIN28AQ9H9Z2 209 aaKnown RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 PLAC1Q9HBJ0 212 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 SCOCQ9UIL1 159 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 YARS2Q9Y2Z4 477 aaKnown RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 VWA7Q9Y334 891 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ADGRG4Q8IZF6 3080 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 GTF3C1Q12789 2109 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 HMX2A2RU54 273 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 C4orf51C9J302 202 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 WWP2O00308 870 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 ICMTO60725 284 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 TRIM13O60858 407 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 OR2J2O76002 312 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 WDR47O94967 919 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 PROCP04070 461 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 ENO1P06733 434 aaKnown RBP8.2□□□□□ -1.1
TDP1-208ENST00000553989 MSX1P28360 303 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 PLA2G16P53816 162 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 HSD17B7P56937 341 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 RAB38P57729 211 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 NUP107P57740 925 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 SLBPQ14493 270 aaKnown RBP eCLIP8.2□□□□□ -1.1
TDP1-208ENST00000553989 RCN1Q15293 331 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 TRIM40Q6P9F5 258 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 TRMT10BQ6PF06 316 aaKnown RBP8.2□□□□□ -1.1
TDP1-208ENST00000553989 SBSNQ6UWP8 590 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 C16orf47Q6ZP98 133 aaPredicted RBP8.2□□□□□ -1.1
TDP1-208ENST00000553989 LRRC74BQ6ZQY2 392 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 GK5Q6ZS86 529 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 SLC22A16Q86VW1 577 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 CNTN4Q8IWV2 1026 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 GPALPP1Q8IXQ4 340 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 KLHDC8AQ8IYD2 350 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 CLYBLQ8N0X4 340 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 KRT78Q8N1N4 520 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 TMEM132CQ8N3T6 1108 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 TTLQ8NG68 377 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 OR5M9Q8NGP3 310 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 OR6Y1Q8NGX8 325 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 LILRB4Q8NHJ6 448 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 CREB3L4Q8TEY5 395 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 JADE3Q92613 823 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 TTTY12Q9BZ98 90 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 FAM192AQ9GZU8 254 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 C12orf65Q9H3J6 166 aaKnown RBP8.2□□□□□ -1.1
TDP1-208ENST00000553989 LDAHQ9H6V9 325 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 ADAP2Q9NPF8 381 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 PNPLA3Q9NST1 481 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 NDE1Q9NXR1 346 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 ALKBH4Q9NXW9 302 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 VTI1BQ9UEU0 232 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 HRH3Q9Y5N1 445 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 CLCA3PQ9Y6N3 262 aa8.2□□□□□ -1.1
TDP1-208ENST00000553989 MED13LQ71F56 2210 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 MYOCOSA0A1B0GUC4 107 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 PINLYPA6NC86 204 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 ANKDD1BA6NHY2 528 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 NCF1BA6NI72 391 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 NCF1CA8MVU1 366 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 CDC7O00311 574 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 BCKDKO14874 412 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 CLGNO14967 610 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 PRKNO60260 465 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 CCNT2O60583 730 aaKnown RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 PIAS1O75925 651 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 TOXO94900 526 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 OR6B1O95007 311 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 NCF1P14598 390 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 ZNF37AP17032 561 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 IGFBP2P18065 325 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 TNNI3P19429 210 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 ACVR2AP27037 513 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 SERPINB5P36952 375 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 SOX3P41225 446 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 MAGEA12P43365 314 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 IDH3AP50213 366 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 ALDH18A1P54886 795 aaKnown RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 IRX1P78414 480 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 STX4Q12846 297 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 RUNX2Q13950 521 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 RCN2Q14257 317 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 GXYLT1Q4G148 440 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 CFAP157Q5JU67 520 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 TMIGD1Q6UXZ0 262 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 HSDL2Q6YN16 418 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 B3GNT6Q6ZMB0 384 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 RTL4Q6ZR62 310 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 GALNT7Q86SF2 657 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 DMRTC2Q8IXT2 367 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 ZNF595Q8IYB9 648 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 ULK2Q8IYT8 1036 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms