RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ALDH9A1P49189 494 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 NCBP2P52298 156 aaKnown RBP eCLIP10.21□□□□□ -0.77
PABPN1-203ENST00000553960 PDX1P52945 283 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 FOLH1Q04609 750 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 FUT7Q11130 342 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 REEP3Q6NUK4 255 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 CBLL1Q75N03 491 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 EIF3MQ7L2H7 374 aaKnown RBP10.21□□□□□ -0.77
PABPN1-203ENST00000553960 PRSS41Q7RTY9 318 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 NAXDQ8IW45 347 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 C10orf111Q8N326 155 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 RNF148Q8N7C7 305 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 Q8N9G6 341 aaPredicted RBP10.21□□□□□ -0.77
PABPN1-203ENST00000553960 CHDHQ8NE62 594 aaPredicted RBP10.21□□□□□ -0.77
PABPN1-203ENST00000553960 CATSPER1Q8NEC5 780 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 ADCY4Q8NFM4 1077 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 OR51Q1Q8NH59 317 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 CDC26Q8NHZ8 85 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 ZCCHC10Q8TBK6 192 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 RHBDD1Q8TEB9 315 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 RASSF5Q8WWW0 418 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 N4BP2L2Q92802 583 aaPredicted RBP10.21□□□□□ -0.77
PABPN1-203ENST00000553960 EXOSC8Q96B26 276 aaKnown RBP10.21□□□□□ -0.77
PABPN1-203ENST00000553960 SLCO4A1Q96BD0 722 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 NACC2Q96BF6 587 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 CCDC74BQ96LY2 380 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 MS4A4EQ96PG1 132 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 TRNT1Q96Q11 434 aaKnown RBP10.21□□□□□ -0.77
PABPN1-203ENST00000553960 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.77
PABPN1-203ENST00000553960 ACTRT3Q9BYD9 372 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 SAP130Q9H0E3 1048 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 WDR54Q9H977 334 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 CXorf21Q9HAI6 301 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 SEMA4GQ9NTN9 838 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 CALML5Q9NZT1 146 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 RIMS3Q9UJD0 308 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 PACSIN3Q9UKS6 424 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 RARRES3Q9UL19 164 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 PCDHGA3Q9Y5H0 932 aa10.21□□□□□ -0.77
PABPN1-203ENST00000553960 DSPPQ9NZW4 1301 aa10.21□□□□□ -0.78
PABPN1-203ENST00000553960 VPS13AQ96RL7 3174 aa10.21□□□□□ -0.78
PABPN1-203ENST00000553960 DNAH14Q0VDD8 3507 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 A0A0A6YYC8 382 aaPredicted RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 I3L1I5 382 aaPredicted RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 SGK494L7N484 410 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 UPK1AO00322 258 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 HMGN4O00479 90 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 NVLO15381 856 aaKnown RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 FGF17O60258 216 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 RDH16O75452 317 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 GCM2O75603 506 aaPredicted RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 KRT36O76013 467 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 PDE9AO76083 593 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 CTSBP07858 339 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 LCN1P31025 176 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 KHKP50053 298 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 CDK9P50750 372 aaKnown RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 CLCN2P51788 898 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 RAB15P59190 212 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 DSTNP60981 165 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 PLIN5Q00G26 463 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 EP300Q09472 2414 aaPredicted RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 RCN1Q15293 331 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 CYP51A1Q16850 503 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 ZSWIM7Q19AV6 140 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 DEFB110Q30KQ9 67 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 GCNT6Q5T4J0 391 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 MFSD12Q6NUT3 480 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 CDC73Q6P1J9 531 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 RNF111Q6ZNA4 994 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 RBM44Q6ZP01 1051 aaKnown RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 ERMP1Q7Z2K6 904 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 ZC3H7AQ8IWR0 971 aaKnown RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 CCDC116Q8IYX3 515 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 PACRGLQ8N7B6 248 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 TMEM102Q8N9M5 508 aaPredicted RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 FAM156AQ8NDB6 213 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 C17orf47Q8NEP4 570 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 PRSS33Q8NF86 280 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 OR7G1Q8NGA0 311 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 SLC26A7Q8TE54 656 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 CANT1Q8WVQ1 401 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 SLC35B4Q969S0 331 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 CSF3RQ99062 836 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 GTPBP2Q9BX10 602 aaKnown RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 VCX3BQ9H321 246 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 ZNF304Q9HCX3 659 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 IL1RAPQ9NPH3 570 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 FSCN3Q9NQT6 498 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 AGPAT4Q9NRZ5 378 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 MAT2BQ9NZL9 334 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 ANAPC2Q9UJX6 822 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 NXT1Q9UKK6 140 aaKnown RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 FAF1Q9UNN5 650 aaPredicted RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 TMEM184BQ9Y519 407 aaPredicted RBP10.2□□□□□ -0.78
PABPN1-203ENST00000553960 PCDHGB3Q9Y5G1 929 aa10.2□□□□□ -0.78
PABPN1-203ENST00000553960 A0A0G2JPF8 293 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 TCRBV16S1A1N1A0A5B0 115 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 TMEM229AB2RXF0 380 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms