RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 RAB43Q86YS6 212 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 PRSS58Q8IYP2 241 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 OR9A2Q8NGT5 310 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 RIT1Q92963 219 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 IP6K3Q96PC2 410 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 CGREF1Q99674 301 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 SLC35A5Q9BS91 424 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 SPATA9Q9BWV2 254 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 PAIP1Q9H074 479 aaKnown RBP13.58□□□□□ -0.24
SHMT2-210ENST00000553950 LRMDAQ9H2I8 198 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 COPS7AQ9UBW8 275 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 PRPF19Q9UMS4 504 aaKnown RBP13.58□□□□□ -0.24
SHMT2-210ENST00000553950 CFL2Q9Y281 166 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 PCDHGA6Q9Y5G7 932 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 SNX8Q9Y5X2 465 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 CLCA3PQ9Y6N3 262 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 AHCTF1Q8WYP5 2266 aa13.58□□□□□ -0.24
SHMT2-210ENST00000553950 TEX51A0A1B0GUA7 166 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 TTC36A6NLP5 189 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 WASHC1A8K0Z3 465 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 EMC8O43402 210 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 PLOD3O60568 738 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 PRAMEF2O60811 474 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 RECKO95980 971 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 TNNI3P19429 210 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 DLSTP36957 453 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 OR4D2P58180 307 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 BTG2P78543 158 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 ID2Q02363 134 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 MAP4K2Q12851 820 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 FADDQ13158 208 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 PRICKLE4Q2TBC4 344 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 ZNF628Q5EBL2 1059 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 TMEM107Q6UX40 140 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 BNC2Q6ZN30 1099 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-210ENST00000553950 ZNF621Q6ZSS3 439 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 ZNF551Q7Z340 670 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-210ENST00000553950 TIPARPQ7Z3E1 657 aaKnown RBP13.57□□□□□ -0.24
SHMT2-210ENST00000553950 SZRD1Q7Z422 152 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 DTX1Q86Y01 620 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 OR4N5Q8IXE1 308 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 RBM15BQ8NDT2 890 aaKnown RBP13.57□□□□□ -0.24
SHMT2-210ENST00000553950 OR7G1Q8NGA0 311 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 UCN3Q969E3 161 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 MCUR1Q96AQ8 359 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 FBXL20Q96IG2 436 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 ANKRD27Q96NW4 1050 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 LPAR4Q99677 370 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 BTBD10Q9BSF8 475 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 INPP5KQ9BT40 448 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 MMADHCQ9H3L0 296 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-210ENST00000553950 CXorf21Q9HAI6 301 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 NECTIN3Q9NQS3 549 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 ZCCHC3Q9NUD5 404 aaKnown RBP13.57□□□□□ -0.24
SHMT2-210ENST00000553950 THUMPD1Q9NXG2 353 aaKnown RBP13.57□□□□□ -0.24
SHMT2-210ENST00000553950 MAT2BQ9NZL9 334 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 MAP10Q9P2G4 905 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 TCFL5Q9UL49 500 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 FARSAQ9Y285 508 aaKnown RBP13.57□□□□□ -0.24
SHMT2-210ENST00000553950 MSRB2Q9Y3D2 182 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 L3MBTL1Q9Y468 752 aa13.57□□□□□ -0.24
SHMT2-210ENST00000553950 TRBV5-3A0A0A0MS03 114 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 A0A1W2PQ72 361 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 SAGE2PA6NJ88 616 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 C17orf105B2RV13 164 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 FXYD1O00168 92 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 HOXB9P17482 250 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 MMP11P24347 488 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 MC3RP41968 323 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 CCT3P49368 545 aaKnown RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 PRIM2P49643 509 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 KHKP50053 298 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 CDK9P50750 372 aaKnown RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 PSME3P61289 254 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 AP2B1P63010 937 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 PSPHP78330 225 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 GAB1Q13480 694 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 COL9A2Q14055 689 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 PRSS53Q2L4Q9 553 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 SAMD4BQ5PRF9 694 aaKnown RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 LCN10Q6JVE6 187 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 FAM199XQ6PEV8 388 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 ZCCHC12Q6PEW1 402 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 TMEM205Q6UW68 189 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 ANGPTL8Q6UXH0 198 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 DLEU7Q6UYE1 221 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 ANKRD37Q7Z713 158 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 OR2L13Q8N349 312 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 MORN4Q8NDC4 146 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 TSLPQ969D9 159 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 ELP4Q96EB1 424 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 NEURL3Q96EH8 262 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 SLC35G5Q96KT7 338 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 CPPED1Q9BRF8 314 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 CXorf36Q9H7Y0 433 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 GPN2Q9H9Y4 310 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 IL1RL2Q9HB29 575 aa13.56□□□□□ -0.24
SHMT2-210ENST00000553950 SIRT3Q9NTG7 399 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-210ENST00000553950 RYDENQ9NUL5 291 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms