RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 COMMD6Q7Z4G1 85 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 CUZD1Q86UP6 607 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 RPS19BP1Q86WX3 136 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 SAMD14Q8IZD0 417 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ST13P4Q8IZP2 240 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 KIRREL3Q8IZU9 778 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 TMEM156Q8N614 296 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 C1orf52Q8N6N3 182 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 RBMXL3Q8N7X1 1067 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 GALNT11Q8NCW6 608 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 OR4K14Q8NGD5 310 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 OR1N1Q8NGS0 311 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 CPT1CQ8TCG5 803 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 EDARADDQ8WWZ3 215 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 HAS2Q92819 552 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 TMEM125Q96AQ2 219 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PGM2Q96G03 612 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 HBEGFQ99075 208 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PAIP2Q9BPZ3 127 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 MESP1Q9BRJ9 268 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 GATA5Q9BWX5 397 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 SHCBP1LQ9BZQ2 653 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 OR8D2Q9GZM6 311 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 RNF32Q9H0A6 362 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 EPN3Q9H201 632 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 C12orf65Q9H3J6 166 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 CDCP1Q9H5V8 836 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 FARSBQ9NSD9 589 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 NKIRAS1Q9NYS0 192 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PLA2G3Q9NZ20 509 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 LUZP4Q9P127 313 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 SLC17A7Q9P2U7 560 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 MCM8Q9UJA3 840 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 FIS1Q9Y3D6 152 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ATG4BQ9Y4P1 393 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 TIMM22Q9Y584 194 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 COPG1Q9Y678 874 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF780BQ9Y6R6 833 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 A0A1W2PR48 441 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 GLOD5A6NK44 160 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 GABRR3A8MPY1 467 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 TMPRSS11DO60235 418 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 FGF17O60258 216 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 ADAM11O75078 769 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 ERAL1O75616 437 aaKnown RBP7.77□□□□□ -1.17
PSEN1-209ENST00000553855 SNUPNO95149 360 aaKnown RBP7.77□□□□□ -1.17
PSEN1-209ENST00000553855 HSPA4LO95757 839 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 AIFM1O95831 613 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 WDPCPO95876 746 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 BPGMP07738 259 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 CELA2AP08217 269 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 DRD2P14416 443 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 NT5EP21589 574 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 CYB561P49447 251 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 HNRNPFP52597 415 aaKnown RBP7.77□□□□□ -1.17
PSEN1-209ENST00000553855 GYS2P54840 703 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 MLLT10P55197 1068 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 HNRNPH2P55795 449 aaKnown RBP7.77□□□□□ -1.17
PSEN1-209ENST00000553855 HMGCS1Q01581 520 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 ID2Q02363 134 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 GALNT1Q10472 559 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-209ENST00000553855 INPP5JQ15735 1006 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-209ENST00000553855 INAQ16352 499 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 COLEC12Q5KU26 742 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 TCHHL1Q5QJ38 904 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-209ENST00000553855 HLA-DQA1Q5Y7H0 255 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 C18orf63Q68DL7 685 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 FCRLBQ6BAA4 426 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 SCIMPQ6UWF3 145 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 Q6ZS92 163 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 SLC29A4Q7RTT9 530 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 CRLF3Q8IUI8 442 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 OR4N5Q8IXE1 308 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 DDIASQ8IXT1 998 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 CLYBLQ8N0X4 340 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 TMEM178AQ8NBL3 297 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 TMEM52Q8NDY8 209 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 CDC26Q8NHZ8 85 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 ELP5Q8TE02 316 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 RIT1Q92963 219 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 NCLNQ969V3 563 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 METTL2AQ96IZ6 378 aaKnown RBP7.77□□□□□ -1.17
PSEN1-209ENST00000553855 KCNA7Q96RP8 456 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 CNPPD1Q9BV87 410 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 TRIM4Q9C037 500 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 WNT10AQ9GZT5 417 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 MIEF1Q9NQG6 463 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 ERVK-11Q9UQG0 969 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 ENTPD4Q9Y227 616 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 HIF3AQ9Y2N7 669 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 ASB4Q9Y574 426 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 FER1L5A0AVI2 2057 aa7.77□□□□□ -1.17
PSEN1-209ENST00000553855 SCN3AQ9NY46 2000 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 A0A1B0GTL3 188 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 MYOCOSA0A1B0GUC4 107 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 WDR91A4D1P6 747 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 BIRC5O15392 142 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 TYROBPO43914 113 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 PRAMEF2O60811 474 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms