RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RCHY1Q96PM5 261 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 DESI2Q9BSY9 194 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 TEX13BQ9BXU2 312 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ANKRD2Q9GZV1 360 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 MMADHCQ9H3L0 296 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-210ENST00000553693 PLEKHA3Q9HB20 300 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ABCB8Q9NUT2 735 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 TMOD3Q9NYL9 352 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 MOSPD1Q9UJG1 213 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ZNF346Q9UL40 294 aaKnown RBP2.86□□□□□ -1.95
SCFD1-210ENST00000553693 KLK4Q9Y5K2 254 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 LIPGQ9Y5X9 500 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 AKAP12Q02952 1782 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 BTAF1O14981 1849 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 TNS2Q63HR2 1409 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 TUBGCP6Q96RT7 1819 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 WNK3Q9BYP7 1800 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 TRBV5-4A0A0C4DH59 114 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 C2orf92A0A1B0GVN3 265 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 HTR3EA5X5Y0 456 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 ZNF263O14978 683 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 MLNRO43193 412 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 CRCPO75575 148 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 PGLSO95336 258 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 MOCS2O96007 188 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-210ENST00000553693 UMPSP11172 480 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 KRT3P12035 628 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 TCF4P15884 667 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 HLA-DPA1P20036 260 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 PRKCIP41743 596 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 RBBP4Q09028 425 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 TNK1Q13470 666 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 SLMAPQ14BN4 828 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 HYAL4Q2M3T9 481 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 ZNF674Q2M3X9 581 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 TWISTNBQ3B726 338 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-210ENST00000553693 C2orf76Q3KRA6 126 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 C6orf136Q5SQH8 315 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 FAM46CQ5VWP2 391 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 REP15Q6BDI9 236 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 IYDQ6PHW0 289 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 NUFIP2Q7Z417 695 aaKnown RBP2.85□□□□□ -1.95
SCFD1-210ENST00000553693 HOOK3Q86VS8 718 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 TBC1D10CQ8IV04 446 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 FAM219AQ8IW50 185 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 ELMOD1Q8N336 334 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 Q8NFD4 153 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 OR6T1Q8NGN1 323 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 PCNPQ8WW12 178 aaKnown RBP2.85□□□□□ -1.95
SCFD1-210ENST00000553693 HSD17B14Q9BPX1 270 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 C2orf40Q9H1Z8 148 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 LIME1Q9H400 295 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 UBE2TQ9NPD8 197 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-210ENST00000553693 PDRG1Q9NUG6 133 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 NIP7Q9Y221 180 aaKnown RBP eCLIP2.85□□□□□ -1.95
SCFD1-210ENST00000553693 SLC6A5Q9Y345 797 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 CCDC7Q96M83 1385 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 QSER1Q2KHR3 1735 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 ARHGEF28Q8N1W1 1705 aaKnown RBP2.85□□□□□ -1.95
SCFD1-210ENST00000553693 CPSF1Q10570 1443 aaKnown RBP2.85□□□□□ -1.95
SCFD1-210ENST00000553693 PPIP5K1Q6PFW1 1433 aa2.85□□□□□ -1.95
SCFD1-210ENST00000553693 RGPD5Q99666 1765 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 SLIT3O75094 1523 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 TEX48A0A1B0GUV7 120 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 LOC390937A0A1W2PQ73 354 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 ANXA2P2A6NMY6 339 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 FOXI3A8MTJ6 420 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-210ENST00000553693 DDX39AO00148 427 aaKnown RBP2.84□□□□□ -1.95
SCFD1-210ENST00000553693 TCF7P36402 384 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-210ENST00000553693 BRCC3P46736 316 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 RPP38P78345 283 aaKnown RBP2.84□□□□□ -1.95
SCFD1-210ENST00000553693 TEFQ10587 303 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 RCN2Q14257 317 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 SMC1AQ14683 1233 aaKnown RBP2.84□□□□□ -1.95
SCFD1-210ENST00000553693 MORF4L2Q15014 288 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 SLC22A6Q4U2R8 563 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 LBHQ53QV2 105 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-210ENST00000553693 NHSL2Q5HYW2 709 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 LIPJQ5W064 366 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 KLHL10Q6JEL2 608 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 TRAT1Q6PIZ9 186 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 PAMR1Q6UXH9 720 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 RFPL4BQ6ZWI9 263 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 TIGD4Q8IY51 512 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 LIPHQ8WWY8 451 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 ATP6V0A1Q93050 837 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 PHYHIPLQ96FC7 376 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 ERO1AQ96HE7 468 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 C5orf66Q9H5L9 145 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 ASB8Q9H765 288 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 PDFQ9HBH1 243 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 ITM2BQ9Y287 266 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 KNSTRNQ9Y448 316 aa2.84□□□□□ -1.95
SCFD1-210ENST00000553693 ITSN1Q15811 1721 aa2.84□□□□□ -1.96
SCFD1-210ENST00000553693 NSD2O96028 1365 aa2.84□□□□□ -1.96
SCFD1-210ENST00000553693 ABCC6O95255 1503 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 TRPM1Q7Z4N2 1603 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 LRRD1A4D1F6 860 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 TMCO5BA8MYB1 307 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 PPIP5K2O43314 1243 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms