RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ASRGL1Q7L266 308 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 OR1B1Q8NGR6 318 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 CHPT1Q8WUD6 406 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 TMEM37Q8WXS4 190 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 PHYHIPQ92561 330 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 SLC45A3Q96JT2 553 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 ZNF599Q96NL3 588 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 NLNQ9BYT8 704 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 STRADBQ9C0K7 418 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 TMEM231Q9H6L2 316 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 NT5DC2Q9H857 520 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 MOB1AQ9H8S9 216 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 NGBQ9NPG2 151 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 STARD5Q9NSY2 213 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 ZNF175Q9Y473 711 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 FAM205AQ6ZU69 1335 aa4.21□□□□□ -1.73
SYNE2-210ENST00000553455 SALL1Q9NSC2 1324 aa4.21□□□□□ -1.73
SYNE2-210ENST00000553455 TRGV8A0A0C4DH27 118 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 TXNL1O43396 289 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 TRIM16O95361 564 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 HPRP00739 348 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF883P0CG24 379 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF10P21506 573 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-210ENST00000553455 DNAJB1P25685 340 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 PPP2R1AP30153 589 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 PRDX2P32119 198 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ETV5P41161 510 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 GPC3P51654 580 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 PRELPP51888 382 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 GMFBP60983 142 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 MYBPC1Q00872 1141 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 SPP2Q13103 211 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 SNX1Q13596 522 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ZKSCAN8Q15776 578 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-210ENST00000553455 CCL14Q16627 93 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 HAGHQ16775 308 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 HKDC1Q2TB90 917 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 IL23RQ5VWK5 629 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 DOK6Q6PKX4 331 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 SYVN1Q86TM6 617 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 RPAINQ86UA6 219 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 CCDC71Q8IV32 467 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF781Q8N8C0 355 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 BANPQ8N9N5 519 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ICA1LQ8NDH6 482 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF397Q8NF99 534 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-210ENST00000553455 U2AF1L4Q8WU68 220 aaKnown RBP4.21□□□□□ -1.74
SYNE2-210ENST00000553455 AGAP3Q96P47 875 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 IWS1Q96ST2 819 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 LRRC61Q9BV99 259 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 GFRA4Q9GZZ7 299 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 RAB17Q9H0T7 212 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 Q9HAA7 133 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 HPF1Q9NWY4 346 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 CTSZQ9UBR2 303 aa4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF346Q9UL40 294 aaKnown RBP4.21□□□□□ -1.74
SYNE2-210ENST00000553455 ASB14A6NK59 587 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 SORBS2O94875 1100 aaKnown RBP4.2□□□□□ -1.74
SYNE2-210ENST00000553455 HCKP08631 526 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 OR9G9P0C7N8 305 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 ARF4P18085 180 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-210ENST00000553455 TMOD1P28289 359 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 MAGEA4P43358 317 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 NUMBP49757 651 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 ERVK11-1P61568 191 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 HTD2P86397 168 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 GABPB1Q06547 395 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-210ENST00000553455 ELAVL2Q12926 359 aaKnown RBP4.2□□□□□ -1.74
SYNE2-210ENST00000553455 ENPP2Q13822 863 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 BTG3Q14201 252 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF699Q32M78 642 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 LDLRAP1Q5SW96 308 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 DDI2Q5TDH0 399 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 RAET1GQ6H3X3 334 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 IRGCQ6NXR0 463 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 FAAP20Q6NZ36 180 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 CATSPER4Q7RTX7 472 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 Q8N377 158 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 FAM71CQ8NEG0 241 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 FBXO25Q8TCJ0 367 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF689Q96CS4 500 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-210ENST00000553455 CCDC51Q96ER9 411 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 NMNAT2Q9BZQ4 307 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 FAM124BQ9H5Z6 455 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-210ENST00000553455 DCTPP1Q9H773 170 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF446Q9NWS9 450 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 TAS2R3Q9NYW6 316 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 TUBGCP4Q9UGJ1 667 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 MUTYHQ9UIF7 546 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 SPATA2Q9UM82 520 aa4.2□□□□□ -1.74
SYNE2-210ENST00000553455 KLF2Q9Y5W3 355 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-210ENST00000553455 A0A0A6YYD4 124 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 RGSL1A5PLK6 1076 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 A8MXK9 166 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 POP4O95707 220 aaKnown RBP4.19□□□□□ -1.74
SYNE2-210ENST00000553455 OAS1P00973 400 aaKnown RBP4.19□□□□□ -1.74
SYNE2-210ENST00000553455 RNF224P0DH78 156 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 IL4RP24394 825 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms