RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 UBXN8O00124 270 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 ETHE1O95571 254 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 NR2F6P10588 404 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 GFAPP14136 432 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SSTR1P30872 391 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SPRP35270 261 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 GGT5P36269 586 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 TMED10P49755 219 aaKnown RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 ASCL1P50553 236 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 IST1P53990 364 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 NRG3P56975 720 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 RPP38P78345 283 aaKnown RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 BIKQ13323 160 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SNTB1Q13884 538 aaKnown RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SF3B4Q15427 424 aaKnown RBP eCLIP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 TBCCQ15814 346 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 PIGGQ5H8A4 983 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 RIPPLY2Q5TAB7 128 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 OR4C11Q6IEV9 310 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 C9orf40Q8IXQ3 194 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SLC15A4Q8N697 577 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 TEX9Q8N6V9 391 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 PPM1NQ8N819 430 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 OR10G3Q8NGC4 313 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 DOK4Q8TEW6 326 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 ZNF721Q8TF20 911 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 ZNF473Q8WTR7 871 aaKnown RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 DIO2Q92813 273 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 TANKQ92844 425 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 RIT1Q92963 219 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 ANKRD9Q96BM1 317 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 HSPBAP1Q96EW2 488 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 WDR34Q96EX3 536 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 FBXL20Q96IG2 436 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 MTERF1Q99551 399 aaKnown RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 GPR22Q99680 433 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SORBS1Q9BX66 1292 aaKnown RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 ZNF703Q9H7S9 590 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 ACTR8Q9H981 624 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 BRD7Q9NPI1 651 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SEMA4BQ9NPR2 832 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 CCM2LQ9NUG4 571 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 LYARQ9NX58 379 aaKnown RBP9.13□□□□□ -0.95
ACTN1-208ENST00000553370 MOCS1Q9NZB8 636 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SPRR3Q9UBC9 169 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 CAMK2AQ9UQM7 478 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 L3MBTL1Q9Y468 752 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 CLDN16Q9Y5I7 305 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 SAR1BQ9Y6B6 198 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 TLN2Q9Y4G6 2542 aa9.13□□□□□ -0.95
ACTN1-208ENST00000553370 HEATR5AQ86XA9 2040 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 EEF1E1-BLOC1S5C9J1V9 151 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 K7EPI3 171 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 EEF1E1O43324 174 aaKnown RBP9.12□□□□□ -0.95
ACTN1-208ENST00000553370 CD22P20273 847 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 GSTT1P30711 240 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 STX2P32856 288 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 ADH7P40394 386 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 FLYWCH1Q4VC44 716 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 RTL6Q6ICC9 239 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 GRHL2Q6ISB3 625 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 KLC3Q6P597 504 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 CMC1Q7Z7K0 106 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 ULK2Q8IYT8 1036 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 ST13P4Q8IZP2 240 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-208ENST00000553370 OR7G3Q8NG95 312 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 HUS1BQ8NHY5 278 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 NEIL3Q8TAT5 605 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 NINJ1Q92982 152 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 ATP6V1E2Q96A05 226 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 WWTR1Q9GZV5 400 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 ST6GALNAC2Q9UJ37 374 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 PTBP2Q9UKA9 531 aaKnown RBP9.12□□□□□ -0.95
ACTN1-208ENST00000553370 PLEKHA6Q9Y2H5 1048 aa9.12□□□□□ -0.95
ACTN1-208ENST00000553370 ABCA2Q9BZC7 2435 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 C2orf92A0A1B0GVN3 265 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 TCRBV9S1A1TA0A576 114 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 GLOD5A6NK44 160 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 OR6C76A6NM76 312 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 CXorf49A8MYA2 514 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 E7ESA3 106 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 HRKO00198 91 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 EIF3HO15372 352 aaKnown RBP eCLIP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 ZNF354AO60765 605 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 KERAO60938 352 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 PRKRAO75569 313 aaKnown RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 SCELO95171 688 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 TBX6O95947 436 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 LTA4HP09960 611 aaKnown RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 DRD2P14416 443 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 TACR1P25103 407 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 PTX3P26022 381 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 PIK3R1P27986 724 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 CRABP2P29373 138 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 CPA2P48052 419 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 MRPS25P82663 173 aaKnown RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 FOXO1Q12778 655 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 RPS6KA2Q15349 733 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 UAP1Q16222 522 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms