RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 SULF2Q8IWU5 870 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 C9orf40Q8IXQ3 194 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 VWA5B2Q8N398 1253 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 ZNF321PQ8N8H1 164 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 TP53INP1Q96A56 240 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 TM4SF18Q96CE8 201 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 FAM111AQ96PZ2 611 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 KCNA7Q96RP8 456 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 BRINP2Q9C0B6 783 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 WWTR1Q9GZV5 400 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 LIN28AQ9H9Z2 209 aaKnown RBP12.34□□□□□ -0.43
CEP290-205ENST00000550962 MIEF1Q9NQG6 463 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 SIRT5Q9NXA8 310 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 EHD3Q9NZN3 535 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 UTS2RQ9UKP6 389 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 RAB21Q9UL25 225 aa12.34□□□□□ -0.43
CEP290-205ENST00000550962 RP1L1Q8IWN7 2480 aaPredicted RBP12.33□□□□□ -0.44
CEP290-205ENST00000550962 TRGV8A0A0C4DH27 118 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 TMEM200CA6NKL6 621 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 NPIPA5E9PKD4 350 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 TP53I11O14683 189 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 AZIN1O14977 448 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 LRRTM2O43300 516 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 NPHS1O60500 1241 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 ABOP16442 354 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 MST1P26927 711 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 HTR6P50406 440 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 SLC37A1P57057 533 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 KCNK10P57789 538 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 HMGCS1Q01581 520 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 BTKQ06187 659 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 FUT7Q11130 342 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 EBPQ15125 230 aaKnown RBP12.33□□□□□ -0.44
CEP290-205ENST00000550962 FAM47EQ6ZV65 393 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 TRIM46Q7Z4K8 759 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 SLC22A16Q86VW1 577 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 CPSF7Q8N684 471 aaKnown RBP12.33□□□□□ -0.44
CEP290-205ENST00000550962 ZFP62Q8NB50 900 aaPredicted RBP12.33□□□□□ -0.44
CEP290-205ENST00000550962 C17orf47Q8NEP4 570 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 PPP1R14CQ8TAE6 165 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 ERP27Q96DN0 273 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 FAM173AQ9BQD7 235 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 STMN4Q9H169 189 aaPredicted RBP12.33□□□□□ -0.44
CEP290-205ENST00000550962 OR10A5Q9H207 317 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 CNIH4Q9P003 139 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 PRODH2Q9UF12 536 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 ERRFI1Q9UJM3 462 aaPredicted RBP12.33□□□□□ -0.44
CEP290-205ENST00000550962 NPIPA1Q9UND3 350 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 DLGAP4Q9Y2H0 992 aa12.33□□□□□ -0.44
CEP290-205ENST00000550962 UBFD1O14562 309 aaKnown RBP12.32□□□□□ -0.44
CEP290-205ENST00000550962 CTIFO43310 598 aaKnown RBP12.32□□□□□ -0.44
CEP290-205ENST00000550962 ASNA1O43681 348 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 SLC19A2O60779 497 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 SPAG7O75391 227 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 IL3P08700 152 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 GP1BBP13224 206 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 CHN1P15882 459 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 CNR1P21554 472 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 MPIP34949 423 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 FEN1P39748 380 aaKnown RBP12.32□□□□□ -0.44
CEP290-205ENST00000550962 PSPHP78330 225 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 SRSF1Q07955 248 aaKnown RBP eCLIP12.32□□□□□ -0.44
CEP290-205ENST00000550962 MAP4K2Q12851 820 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 TBCELQ5QJ74 424 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 SLC22A10Q63ZE4 541 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 C16orf47Q6ZP98 133 aaPredicted RBP12.32□□□□□ -0.44
CEP290-205ENST00000550962 DGAT2L6Q6ZPD8 337 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 RNF165Q6ZSG1 346 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 IKBIPQ70UQ0 350 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 MDGA2Q7Z553 956 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 ZNF227Q86WZ6 799 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 FAM13CQ8NE31 585 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 C16orf52Q8NHV5 167 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 CDC26Q8NHZ8 85 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 C16orf78Q8WTQ4 265 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 SPACA9Q96E40 222 aaPredicted RBP12.32□□□□□ -0.44
CEP290-205ENST00000550962 APIPQ96GX9 242 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 BBS4Q96RK4 519 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 BCAP29Q9UHQ4 241 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 CES1P1Q9UKY3 287 aa12.32□□□□□ -0.44
CEP290-205ENST00000550962 BOKQ9UMX3 212 aaPredicted RBP12.32□□□□□ -0.44
CEP290-205ENST00000550962 WASHC1A8K0Z3 465 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 PRRG2O14669 202 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 SEC22BO75396 215 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 SLITRK5O94991 958 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 LDLRP01130 860 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 ESRRAP11474 423 aaPredicted RBP12.31□□□□□ -0.44
CEP290-205ENST00000550962 DDCP20711 480 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 ALDH3A1P30838 453 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 NTSP30990 170 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 SSTR4P31391 388 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 CA7P43166 264 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 FOXA1P55317 472 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 GPR85P60893 370 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 DCAF7P61962 342 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 KCNJ2P63252 427 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 C1QL3Q5VWW1 255 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 SCIMPQ6UWF3 145 aa12.31□□□□□ -0.44
CEP290-205ENST00000550962 FJX1Q86VR8 437 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms