RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 SENP5Q96HI0 755 aaPredicted RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 ATOH8Q96SQ7 321 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 NAPGQ99747 312 aaPredicted RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 FOXC2Q99958 501 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 CENPKQ9BS16 269 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 OR51B5Q9H339 312 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 KCNF1Q9H3M0 494 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 LDAHQ9H6V9 325 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 RPF2Q9H7B2 306 aaKnown RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 NMRAL1Q9HBL8 299 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 SEMA4BQ9NPR2 832 aaPredicted RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 DMRT3Q9NQL9 472 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 QPCTLQ9NXS2 382 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 CNIH4Q9P003 139 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 WHRNQ9P202 907 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 OPTCQ9UBM4 332 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 B4GALT7Q9UBV7 327 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 Q9UFV3 132 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 ACAD8Q9UKU7 415 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 TSC22D4Q9Y3Q8 395 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 L3MBTL1Q9Y468 752 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 NSD1Q96L73 2696 aaPredicted RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 IQANK1A0A1B0GTG1 560 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 MYOCOSA0A1B0GUC4 107 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 ANKRD33BA6NCL7 494 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 LRRC3CA6NJW4 275 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 OR6C76A6NM76 312 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 SYCE1LA8MT33 242 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 SUPT3HB4E1H0 165 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 UGDHO60701 494 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 SUPT3HO75486 399 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 IL2RAP01589 272 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 NID1P14543 1247 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 ALOX15P16050 662 aaPredicted RBP7.01□□□□□ -1.29
NEK3-201ENST00000550331 EPB42P16452 691 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 ENDOUP21128 410 aaKnown RBP7.01□□□□□ -1.29
NEK3-201ENST00000550331 CRABP2P29373 138 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 SERPINB3P29508 390 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 GALNSP34059 522 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 ADH7P40394 386 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 BUD31P41223 144 aaPredicted RBP7.01□□□□□ -1.29
NEK3-201ENST00000550331 RAP1GDS1P52306 607 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 PHEXP78562 749 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 FOLH1Q04609 750 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 FOXD4Q12950 439 aaPredicted RBP7.01□□□□□ -1.29
NEK3-201ENST00000550331 SLAMF1Q13291 335 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 NAB1Q13506 487 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 TBCELQ5QJ74 424 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 OR4C11Q6IEV9 310 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 RNF111Q6ZNA4 994 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 DGAT2L6Q6ZPD8 337 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 C3orf62Q6ZUJ4 267 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 RAPH1Q70E73 1250 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 TAOK1Q7L7X3 1001 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 SLC29A4Q7RTT9 530 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 CCDC91Q7Z6B0 441 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 TBC1D1Q86TI0 1168 aaPredicted RBP7.01□□□□□ -1.29
NEK3-201ENST00000550331 GPR180Q86V85 440 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 CTAGE3PQ8IX95 158 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 OR4N5Q8IXE1 308 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 LRRC25Q8N386 305 aaPredicted RBP7.01□□□□□ -1.29
NEK3-201ENST00000550331 HUS1BQ8NHY5 278 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 NEIL3Q8TAT5 605 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 RGMAQ96B86 450 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 REPS1Q96D71 796 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 ERP44Q9BS26 406 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 CNPPD1Q9BV87 410 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 WWTR1Q9GZV5 400 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 CXXC4Q9H2H0 198 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 ALG9Q9H6U8 611 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 EXO5Q9H790 373 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 PRM3Q9NNZ6 103 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 SAYSD1Q9NPB0 183 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 ACKR4Q9NPB9 350 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 CCM2LQ9NUG4 571 aaPredicted RBP7.01□□□□□ -1.29
NEK3-201ENST00000550331 SPRR3Q9UBC9 169 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 PCDHGA11Q9Y5H2 935 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 CHCHD2Q9Y6H1 151 aaPredicted RBP7.01□□□□□ -1.29
NEK3-201ENST00000550331 CSPG4Q6UVK1 2322 aa7.01□□□□□ -1.29
NEK3-201ENST00000550331 A0A0A6YYD5 115 aa7□□□□□ -1.29
NEK3-201ENST00000550331 HSPB2A8KAH6 182 aa7□□□□□ -1.29
NEK3-201ENST00000550331 CAPN14A8MX76 684 aa7□□□□□ -1.29
NEK3-201ENST00000550331 H0YIV9 168 aa7□□□□□ -1.29
NEK3-201ENST00000550331 UBXN8O00124 270 aa7□□□□□ -1.29
NEK3-201ENST00000550331 HRKO00198 91 aa7□□□□□ -1.29
NEK3-201ENST00000550331 SAP18O00422 153 aaKnown RBP7□□□□□ -1.29
NEK3-201ENST00000550331 PLPP1O14494 284 aa7□□□□□ -1.29
NEK3-201ENST00000550331 PROM1O43490 865 aa7□□□□□ -1.29
NEK3-201ENST00000550331 OR10H2O60403 315 aa7□□□□□ -1.29
NEK3-201ENST00000550331 SH3BGRLO75368 114 aa7□□□□□ -1.29
NEK3-201ENST00000550331 CTAG2O75638 210 aa7□□□□□ -1.29
NEK3-201ENST00000550331 GPR75O95800 540 aa7□□□□□ -1.29
NEK3-201ENST00000550331 LTA4HP09960 611 aaKnown RBP7□□□□□ -1.29
NEK3-201ENST00000550331 RFPL3SP0C7P2 107 aa7□□□□□ -1.29
NEK3-201ENST00000550331 NR2F6P10588 404 aa7□□□□□ -1.29
NEK3-201ENST00000550331 MTHFD2P13995 350 aa7□□□□□ -1.29
NEK3-201ENST00000550331 PTX3P26022 381 aaPredicted RBP7□□□□□ -1.29
NEK3-201ENST00000550331 STX2P32856 288 aa7□□□□□ -1.29
NEK3-201ENST00000550331 HNRNPH2P55795 449 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms