RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	RUNDC3A	Q59EK9	446 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	ZNF628	Q5EBL2	1059 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	NANOGP8	Q6NSW7	305 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	TMEM64	Q6YI46	380 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	SHISA6	Q6ZSJ9	500 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	ARPIN	Q7Z6K5	226 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	KIF2B	Q8N4N8	673 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	ADCY4	Q8NFM4	1077 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	OR8J3	Q8NGG0	315 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	SFXN5	Q8TD22	340 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	ZNF675	Q8TD23	568 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	TMEM125	Q96AQ2	219 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	AURKB	Q96GD4	344 aa	Predicted RBP	11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	DGAT2	Q96PD7	388 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	SPSB2	Q99619	263 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	CADM1	Q9BY67	442 aa	Known RBP	11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	SOX17	Q9H6I2	414 aa	Predicted RBP	11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	NANOG	Q9H9S0	305 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	SPAG4	Q9NPE6	437 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	ASCL3	Q9NQ33	180 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	SNX8	Q9Y5X2	465 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	GMEB1	Q9Y692	573 aa		11.45	□□□□□ -0.58
ERBB3-208	ENST00000549205	RNF103-CHMP3	A0A140T963	221 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	IDS	B3KWA1	339 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	STMND1	H3BQB6	276 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CLIC1	O00299	241 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	PLOD2	O00469	737 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	GSC2	O15499	205 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	DNAJC8	O75937	253 aa	Predicted RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	DXO	O77932	396 aa	Known RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	HEXB	P07686	556 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CD63	P08962	238 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	IFI6	P09912	130 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	RAB40AL	P0C0E4	278 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	NT5E	P21589	574 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	PPIB	P23284	216 aa	Known RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CHI3L1	P36222	383 aa	Predicted RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	MC3R	P41968	323 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CCT3	P49368	545 aa	Known RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	SLC7A2	P52569	658 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	FOXL2	P58012	376 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	MTPN	P58546	118 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	MGAT2	Q10469	447 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CAMK2B	Q13554	666 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	NSDHL	Q15738	373 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	PRICKLE4	Q2TBC4	344 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	SPDYE7P	Q495Y7	208 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	RABL3	Q5HYI8	236 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	TMEM107	Q6UX40	140 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	DGAT2L6	Q6ZPD8	337 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	GPR155	Q7Z3F1	870 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	SLC15A3	Q8IY34	581 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	NLGN4X	Q8N0W4	816 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CLEC4F	Q8N1N0	589 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	OR5AK3P	Q8NH89	298 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	ZFP90	Q8TF47	636 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CT55	Q8WUE5	264 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	KAT2A	Q92830	837 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	PPWD1	Q96BP3	646 aa	Known RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	MOAP1	Q96BY2	351 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	ELP4	Q96EB1	424 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	FAM120B	Q96EK7	910 aa	Known RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	RBM18	Q96H35	190 aa	Known RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CDRT15	Q96T59	188 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	SH3GL1	Q99961	368 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	SLC35A5	Q9BS91	424 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CRB3	Q9BUF7	120 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	NRSN2	Q9GZP1	204 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	IKZF5	Q9H5V7	419 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	EPS8L2	Q9H6S3	715 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CXorf21	Q9HAI6	301 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	TPT1P8	Q9HAU6	139 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	C3orf14	Q9HBI5	128 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	CMTM6	Q9NX76	183 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	MAT2B	Q9NZL9	334 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	NTM	Q9P121	344 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	PTGFRN	Q9P2B2	879 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	TMEM181	Q9P2C4	612 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	ABCD2	Q9UBJ2	740 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	C3orf18	Q9UK00	162 aa		11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205	PRPF19	Q9UMS4	504 aa	Known RBP	11.44	□□□□□ -0.58
ERBB3-208	ENST00000549205		A0A087WV62	115 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	EVPLL	A8MZ36	301 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	NME4	O00746	187 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	EMC8	O43402	210 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	PLOD3	O60568	738 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	RAD1	O60671	282 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	ALOX12B	O75342	701 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	KLF7	O75840	302 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	KRT75	O95678	551 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	C1QC	P02747	245 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	IFNA16	P05015	189 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	SOX18	P35713	384 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	PGM1	P36871	562 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	STAT5A	P42229	794 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	EMP2	P54851	167 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms