RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ATAD3AQ9NVI7 634 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 SNRNP200O75643 2136 aaKnown RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 H0YJX3 145 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 H7BY64 318 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 GMNNO75496 209 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 SCELO95171 688 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 TBX6O95947 436 aaPredicted RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 FCGR1AP12314 374 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 TYRP1P17643 537 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 DDX5P17844 614 aaKnown RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 PPIBP23284 216 aaKnown RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 ITGA3P26006 1051 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 PEX2P28328 305 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 GZMMP51124 257 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 UBE2IP63279 158 aaKnown RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 GLYATQ6IB77 296 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 IZUMO2Q6UXV1 221 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 ADGRG5Q8IZF4 528 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 TBC1D19Q8N5T2 526 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 TRPV3Q8NET8 790 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 ADAMTS17Q8TE56 1095 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 ZNF764Q96H86 408 aaPredicted RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 NSMCE2Q96MF7 247 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 PRAP1Q96NZ9 151 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 BTBD9Q96Q07 612 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 BARD1Q99728 777 aaKnown RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 INPP5KQ9BT40 448 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 MRPS30Q9NP92 439 aaKnown RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 C5AR2Q9P296 337 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 ZNF624Q9P2J8 865 aaPredicted RBP18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 B3GNT3Q9Y2A9 372 aa18.79■□□□□ 0.6
CTDSP2-204ENST00000548823 ELOVL7A1L3X0 281 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 EVPLLA8MZ36 301 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 LRRTM2O43300 516 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 KLHL18O94889 574 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 LAMP1P11279 417 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 PIM1P11309 404 aaPredicted RBP18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 CMPK1P30085 196 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 GRK3P35626 688 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 AHRP35869 848 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 PLIN5Q00G26 463 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 HKDC1Q2TB90 917 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 TMEM35AQ53FP2 167 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 LPCAT4Q643R3 524 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 PWWP2BQ6NUJ5 590 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 TMEM26Q6ZUK4 368 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 AMIGO1Q86WK6 493 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 MICU2Q8IYU8 434 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 OR2L3Q8NG85 312 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 GOT1L1Q8NHS2 421 aaPredicted RBP18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 GFM2Q969S9 779 aaKnown RBP18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 SLC22A18Q96BI1 424 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 NRTNQ99748 197 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 CENPKQ9BS16 269 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 SPATA9Q9BWV2 254 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 XKR8Q9H6D3 395 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 PRM3Q9NNZ6 103 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 RARRES3Q9UL19 164 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 SNX7Q9UNH6 387 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 EXO1Q9UQ84 846 aaKnown RBP18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 DTNAQ9Y4J8 743 aa18.78■□□□□ 0.6
CTDSP2-204ENST00000548823 MDC1Q14676 2089 aaKnown RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 NUP214P35658 2090 aaPredicted RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 IGKV1-8A0A0C4DH67 115 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 A6NL46 340 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 PRSS44E7EML9 344 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 KIF1CO43896 1103 aaKnown RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 BMP2P12643 396 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 GPX2P18283 190 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 NELFEP18615 380 aaKnown RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 SLC19A1P41440 591 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 TRA2BP62995 288 aaKnown RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 ZIC1Q15915 447 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 MED25Q71SY5 747 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 SERPINA11Q86U17 422 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 BPHLQ86WA6 291 aaPredicted RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 DTWD1Q8N5C7 304 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 ST6GALNAC3Q8NDV1 305 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 OR10A6Q8NH74 314 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 LCN9Q8WX39 176 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 RGMAQ96B86 450 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 MIEF2Q96C03 454 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 FAM120BQ96EK7 910 aaKnown RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 REXO5Q96IC2 774 aaKnown RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 LURAP1Q96LR2 239 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 PANX1Q96RD7 426 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 ZNF717Q9BY31 904 aaPredicted RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 IKZF5Q9H5V7 419 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 RPF2Q9H7B2 306 aaKnown RBP18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 SLC6A13Q9NSD5 602 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 CORO2BQ9UQ03 480 aa18.77■□□□□ 0.6
CTDSP2-204ENST00000548823 PLPP1O14494 284 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 OR1F1O43749 312 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 FKBP9O95302 570 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 CHRM5P08912 532 aaPredicted RBP18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 IL1RNP18510 177 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 TPP2P29144 1249 aaPredicted RBP18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 PEBP1P30086 187 aaKnown RBP18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 BSGP35613 385 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 CDKN2CP42773 168 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms