RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 WDR1O75083 606 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 LRATO95237 230 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 SLC35E2P0CK97 266 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 SSTR4P31391 388 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 TBL3Q12788 808 aaKnown RBP16■□□□□ 0.15
CHMP1A-205ENST00000548650 SLC10A1Q14973 349 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 NTRK2Q16620 822 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 DMRTC2Q8IXT2 367 aaPredicted RBP16■□□□□ 0.15
CHMP1A-205ENST00000548650 SARAFQ96BY9 339 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 NSUN5Q96P11 429 aaKnown RBP16■□□□□ 0.15
CHMP1A-205ENST00000548650 SERPINI1Q99574 410 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 SLC6A15Q9H2J7 730 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 LDAHQ9H6V9 325 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 CXorf21Q9HAI6 301 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 ZBTB26Q9HCK0 441 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 RYDENQ9NUL5 291 aaKnown RBP16■□□□□ 0.15
CHMP1A-205ENST00000548650 CNIH4Q9P003 139 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 Q9UFV3 132 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 ITGB1BP2Q9UKP3 347 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 TRGV5A0A0B4J1U4 118 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 STX16-NPEPL1H3BU86 382 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 STX16O14662 325 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 PGRMC2O15173 223 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 ACSL3O95573 720 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 SERPINB3P29508 390 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 ADH7P40394 386 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 ARL1P40616 181 aaPredicted RBP15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 TESK1Q15569 626 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 C1orf185Q5T7R7 199 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 FRG2Q64ET8 278 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 GALNT12Q8IXK2 581 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 PHF21BQ96EK2 531 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 FRG2BQ96QU4 278 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 PAFAH2Q99487 392 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 NTMT1Q9BV86 223 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 MRPL1Q9BYD6 325 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 QPCTLQ9NXS2 382 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 ACAD8Q9UKU7 415 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 MED13LQ71F56 2210 aa15.99■□□□□ 0.15
CHMP1A-205ENST00000548650 A0A1B0GTL3 188 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 FOXO6A8MYZ6 492 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 INHBAP08476 426 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 RPS17P08708 135 aaKnown RBP15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 HOXD4P09016 255 aaPredicted RBP15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 RBP1P09455 135 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 CT62P0C5K7 136 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 CCNG1P51959 295 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 RPS6KA2Q15349 733 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 GGTA1PQ4G0N0 100 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 C10orf62Q5T681 223 aaPredicted RBP15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 WLSQ5T9L3 541 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 TMEM64Q6YI46 380 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 TAGAPQ8N103 731 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 ZNF597Q96LX8 424 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 DOHHQ9BU89 302 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 EXO5Q9H790 373 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 ACKR4Q9NPB9 350 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 MTRF1LQ9UGC7 380 aaKnown RBP15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 TMCO1Q9UM00 188 aa15.98■□□□□ 0.15
CHMP1A-205ENST00000548650 C2orf92A0A1B0GVN3 265 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 TRIM3O75382 744 aaPredicted RBP15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 PIK3R1P27986 724 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 ECHS1P30084 290 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 ZFP36L2P47974 494 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 FUT7Q11130 342 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 TSNAXIP1Q2TAA8 658 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 BICRALQ6AI39 1079 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 LIX1LQ8IVB5 337 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 ZNF615Q8N8J6 731 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 OR10Q1Q8NGQ4 319 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 NEIL3Q8TAT5 605 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 ATP6V1E2Q96A05 226 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 TP53INP1Q96A56 240 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 B4GALT7Q9UBV7 327 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 KCNN3Q9UGI6 736 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 DMGDHQ9UI17 866 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 ADAM29Q9UKF5 820 aa15.97■□□□□ 0.15
CHMP1A-205ENST00000548650 ANKRD33BA6NCL7 494 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 SMIM24O75264 130 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 CPMP14384 443 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 GABRA1P14867 456 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 SERPINB9P50453 376 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 FBXW4P57775 412 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 IFT88Q13099 833 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 WHAMMP3Q1A5X7 153 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 TBCELQ5QJ74 424 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 FAM219BQ5XKK7 198 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 SEM1Q6ZVN7 128 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 RPS27LQ71UM5 84 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 TAOK1Q7L7X3 1001 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 COMMD6Q7Z4G1 85 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 ULK2Q8IYT8 1036 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 NOA1Q8NC60 698 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 OR4F6Q8NGB9 312 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 ZNF483Q8TF39 744 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 DCAKDQ8WVC6 231 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 DIO2Q92813 273 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 ADIPOR1Q96A54 375 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 C16orf45Q96MC5 204 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 JSRP1Q96MG2 331 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms