RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 EIF3HO15372 352 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 TRIM3O75382 744 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 WISP3O95389 354 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 GPR75O95800 540 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 FOSL1P15407 271 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 EPB42P16452 691 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 BMP7P18075 431 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 CASQ1P31415 396 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 TIMP3P35625 211 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 CASP2P42575 452 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 SLC37A1P57057 533 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 ATP6V0D1P61421 351 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 RPS13P62277 151 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 TNFRSF17Q02223 184 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 SRYQ05066 204 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 TBL3Q12788 808 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 DLG1Q12959 904 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 EBPQ15125 230 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 TBCCQ15814 346 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 NTRK2Q16620 822 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 DCST1Q5T197 706 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 HLA-DQA1Q5Y7H0 255 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 DESI1Q6ICB0 168 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 C3orf62Q6ZUJ4 267 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 RAPH1Q70E73 1250 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 LUZP2Q86TE4 346 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 YRDCQ86U90 279 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 KIF18BQ86Y91 864 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 LACC1Q8IV20 430 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 LAS2Q8IYD9 372 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 ST13P4Q8IZP2 240 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 TAGAPQ8N103 731 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 C17orf53Q8N3J3 647 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 TEX9Q8N6V9 391 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 PDPRQ8NCN5 879 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 RDH11Q8TC12 318 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 CDKL2Q92772 493 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 UBE2E3Q969T4 207 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 MBD6Q96DN6 1003 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 HSPBAP1Q96EW2 488 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 UGT2B28Q9BY64 529 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 ZNF395Q9H8N7 513 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 NEUROD4Q9HD90 331 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 TEX10Q9NXF1 929 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 MS4A12Q9NXJ0 267 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 QPCTLQ9NXS2 382 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 GRHL1Q9NZI5 618 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 OPTCQ9UBM4 332 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 ANGPTL3Q9Y5C1 460 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 NPFFR2Q9Y5X5 522 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 NF1P21359 2839 aa10.94□□□□□ -0.66
TRAFD1-205ENST00000548277 A0A1W2PR48 441 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 TCRBV9S1A1TA0A576 114 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CLCA1A8K7I4 914 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 PGRMC2O15173 223 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 TMPRSS11DO60235 418 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 EEDO75530 441 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 SCELO95171 688 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CLPSP04118 112 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 INHBBP09529 407 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CT62P0C5K7 136 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CTSSP25774 331 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 BUD31P41223 144 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 PIK3CGP48736 1102 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CDK9P50750 372 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 PLTPP55058 493 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 DCAF7P61962 342 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 ILF2Q12905 390 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 FOXF2Q12947 444 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 BIKQ13323 160 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 NNATQ16517 81 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 NSUN5P2Q63ZY6 315 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 VASNQ6EMK4 673 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CYP20A1Q6UW02 462 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CLEC9AQ6UXN8 241 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 TAOK1Q7L7X3 1001 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 LRRC70Q7Z2Q7 622 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CMC1Q7Z7K0 106 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 BIVMQ86UB2 503 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CTAGE3PQ8IX95 158 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 PM20D2Q8IYS1 436 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 C9orf106Q8NAJ2 232 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 STAG3L4Q8TBR4 150 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 SPPL2AQ8TCT8 520 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 ABTB1Q969K4 478 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 WDYHV1Q96HA8 205 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 C18orf12Q96KH6 178 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 RBBP8Q99708 897 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CPNE1Q99829 537 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 CENPKQ9BS16 269 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 PLEKHF2Q9H8W4 249 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 PHF11Q9UIL8 331 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 FOXD3Q9UJU5 478 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 PCDHGB3Q9Y5G1 929 aa10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 ANKHD1Q8IWZ3 2542 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-205ENST00000548277 VPS13CQ709C8 3753 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 LRRC14BA6NHZ5 514 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 FAM159BA6NKW6 160 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms