RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 AGAP7PQ5VUJ5 663 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 FAM92BQ6ZTR7 304 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 RNF44Q7L0R7 432 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NOXA1Q86UR1 476 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NPAS3Q8IXF0 933 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 SLC5A8Q8N695 610 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 BOLLQ8N9W6 283 aaKnown RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 GLB1L3Q8NCI6 653 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 OR7G1Q8NGA0 311 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 OR10H4Q8NGA5 316 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 OR9Q2Q8NGE9 314 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NFKBIDQ8NI38 313 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TNFAIP8L1Q8WVP5 186 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 SLC9A6Q92581 669 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 GTF2H4Q92759 462 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 RIT1Q92963 219 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NTAN1Q96AB6 310 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 EFHD2Q96C19 240 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 BTN2A3PQ96KV6 586 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 SAV1Q9H4B6 383 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 DNAJC11Q9NVH1 559 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NUDT4Q9NZJ9 180 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 IL20RAQ9UHF4 553 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ACSL6Q9UKU0 697 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TBC1D24Q9ULP9 559 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ZFP37Q9Y6Q3 630 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ALPK2Q86TB3 2170 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 A0A075B6Q4 140 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 GLYATL1P3A0A0U1RQE8 302 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TLR4O00206 839 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NARSO43776 548 aaKnown RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 MAFKO60675 156 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 EEDO75530 441 aaKnown RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF205O95201 554 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ALDH2P05091 517 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 GGT1P19440 569 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 XKP51811 444 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TAS2R41P59536 307 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 PPIGQ13427 754 aaKnown RBP eCLIP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 CAMK1Q14012 370 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ATXN7L3Q14CW9 347 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 CT83Q5H943 113 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ATAT1Q5SQI0 421 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF385CQ66K41 422 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF730Q6ZMV8 503 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 B3GNT8Q7Z7M8 397 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 KRT78Q8N1N4 520 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 RNF175Q8N4F7 328 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 PROKR1Q8TCW9 393 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TSPEARQ8WU66 669 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 PTCHD1Q96NR3 888 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 QRSL1Q9H0R6 528 aaKnown RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ABCG5Q9H222 651 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 GPN2Q9H9Y4 310 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 OSER1Q9NX31 292 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 MIOSQ9NXC5 875 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ABCG2Q9UNQ0 655 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NCKAP1Q9Y2A7 1128 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TRIOO75962 3097 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 FXYD6-FXYD2A0A087WZ82 144 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 CENPBD1B2RD01 187 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 MAN2B1O00754 1011 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 PTTG1O95997 202 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ESR1P03372 595 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ALPPL2P10696 532 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 SYN1P17600 705 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 BMP7P18075 431 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NAT1P18440 290 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 RPL17P18621 184 aaKnown RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TACR2P21452 398 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 HNRNPFP52597 415 aaKnown RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 SLC3A1Q07837 685 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 SPHARQ15513 63 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NKPD1Q17RQ9 610 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 XKR4Q5GH76 650 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TOR2AQ5JU69 321 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 BCL2L15Q5TBC7 163 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 PSRC1Q6PGN9 363 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 Q6ZS46 218 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 MRPL10Q7Z7H8 261 aaKnown RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ZFAND4Q86XD8 727 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 FBXL6Q8N531 539 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 WFDC12Q8WWY7 111 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TMEM169Q96HH4 297 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 NEDD4LQ96PU5 975 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 BCL7BQ9BQE9 202 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 FXYD6Q9H0Q3 95 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TM9SF3Q9HD45 589 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ACOT13Q9NPJ3 140 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 DNMT3BQ9UBC3 853 aaKnown RBP5.22□□□□□ -1.57
LIMA1-203ENST00000547825 SLCO3A1Q9UIG8 710 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 STOML2Q9UJZ1 356 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 CMAHPQ9Y471 501 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 GPR45Q9Y5Y3 372 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 LOC102723532A0A0G2JNH3 316 aa5.21□□□□□ -1.57
LIMA1-203ENST00000547825 UBE2QL1A1L167 161 aa5.21□□□□□ -1.57
LIMA1-203ENST00000547825 ARL5CA6NH57 179 aa5.21□□□□□ -1.57
LIMA1-203ENST00000547825 H3BS24 57 aa5.21□□□□□ -1.57
LIMA1-203ENST00000547825 MANBAO00462 879 aa5.21□□□□□ -1.57
LIMA1-203ENST00000547825 S100A6P06703 90 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms