RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CLDN8P56748 225 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 ACTN3Q08043 901 aaPredicted RBP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 RAPSNQ13702 412 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 NKG7Q16617 165 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 AGAP7PQ5VUJ5 663 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 B3GNTL1Q67FW5 361 aaPredicted RBP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 MRPL14Q6P1L8 145 aaKnown RBP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 SHISA6Q6ZSJ9 500 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 CLNKQ7Z7G1 428 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 TICAM1Q8IUC6 712 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 MMP21Q8N119 569 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 KRTCAP2Q8N6L1 136 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 TMEM52Q8NDY8 209 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 PPCDCQ96CD2 204 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 KLHL29Q96CT2 875 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 AGAP4Q96P64 663 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 WDR77Q9BQA1 342 aaPredicted RBP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 TGIF2Q9GZN2 237 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 SLC26A1Q9H2B4 701 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 ZNF385DQ9H6B1 395 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 REEP4Q9H6H4 257 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 WDR54Q9H977 334 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 PRTFDC1Q9NRG1 225 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 SDR39U1Q9NRG7 319 aaPredicted RBP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 MRGBPQ9NV56 204 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 ZIM2Q9NZV7 527 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 MYO7BQ6PIF6 2116 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 CROCCQ5TZA2 2017 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 FCHO1O14526 889 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 ANKRD28O15084 1053 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 CNOT3O75175 753 aaKnown RBP11.29□□□□□ -0.6
HDAC7-226ENST00000547259 ERAL1O75616 437 aaKnown RBP11.29□□□□□ -0.6
HDAC7-226ENST00000547259 SLC22A3O75751 556 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 DCTN3O75935 186 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 CLDN1O95832 211 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 HEXBP07686 556 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 DDX5P17844 614 aaKnown RBP11.29□□□□□ -0.6
HDAC7-226ENST00000547259 MMP11P24347 488 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 ITGA3P26006 1051 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 PPP2R1BP30154 601 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 MRPL19P49406 292 aaKnown RBP11.29□□□□□ -0.6
HDAC7-226ENST00000547259 UFM1P61960 85 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 SLC13A2Q13183 592 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 ANKRD26P1Q6NSI1 321 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 SLC48A1Q6P1K1 146 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 PAOXQ6QHF9 649 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 ANKS4BQ8N8V4 417 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 OR9I1Q8NGQ6 314 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 UCN3Q969E3 161 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 EXOSC8Q96B26 276 aaKnown RBP11.29□□□□□ -0.6
HDAC7-226ENST00000547259 MTERF3Q96E29 417 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 SPSB2Q99619 263 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 PRPF18Q99633 342 aaKnown RBP11.29□□□□□ -0.6
HDAC7-226ENST00000547259 NMUR2Q9GZQ4 415 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 EPS8L2Q9H6S3 715 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 LANCL2Q9NS86 450 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 GIMAP4Q9NUV9 329 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 EHD3Q9NZN3 535 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 ATP6V1HQ9UI12 483 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 UTS2RQ9UKP6 389 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 MKL2Q9ULH7 1088 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 ENTPD4Q9Y227 616 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 MMACHCQ9Y4U1 282 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
HDAC7-226ENST00000547259 A0A1B0GUH1 482 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 VSTM2BA6NLU5 285 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 C9JVG2 144 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 NR5A2O00482 541 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 PGRMC2O15173 223 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 HNRNPRO43390 633 aaKnown RBP11.28□□□□□ -0.6
HDAC7-226ENST00000547259 LDB3O75112 727 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 RNF224P0DH78 156 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 EDN3P14138 238 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 MAOAP21397 527 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 GPX3P22352 226 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 PIK3R1P27986 724 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 HSD17B7P56937 341 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 KCNK10P57789 538 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 FOXL2P58012 376 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 C21orf58P58505 322 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 BTG2P78543 158 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 ID2Q02363 134 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 FOLH1Q04609 750 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 STX4Q12846 297 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 PDE7AQ13946 482 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 DPY19L1Q2PZI1 675 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 PGS1Q32NB8 556 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 AGKQ53H12 422 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 CRB2Q5IJ48 1285 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 CPTPQ5TA50 214 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 FAM69BQ5VUD6 431 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 ZNF787Q6DD87 383 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 IGFL2Q6UWQ7 119 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 QSOX2Q6ZRP7 698 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
HDAC7-226ENST00000547259 MTDHQ86UE4 582 aaKnown RBP11.28□□□□□ -0.6
HDAC7-226ENST00000547259 SCUBE1Q8IWY4 988 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms