RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	MT-ND5	P03915	603 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	NUDT17	P0C025	328 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	SBK3	P0C264	359 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	OR56A5	P0C7T3	313 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	TMIGD3	P0DMS9	266 aa	Predicted RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	VSIG10L2	P0DP72	767 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	VCL	P18206	1134 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	MSH3	P20585	1137 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	RPS3	P23396	243 aa	Known RBP eCLIP	6.25	□□□□□ -1.41	2e-11	■■■■■ 35.6
LDHA-223	ENST00000545215	PTGS2	P35354	604 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	GP5	P40197	560 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	LIMS1	P48059	325 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	SERPINB9	P50453	376 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	CLCNKA	P51800	687 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	FOXL2	P58012	376 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	GPX6	P59796	221 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	UBE2I	P63279	158 aa	Known RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	SLC13A2	Q13183	592 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	FASTKD3	Q14CZ7	662 aa	Known RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	RASA2	Q15283	850 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	RBBP5	Q15291	538 aa	Known RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	ACKR1	Q16570	336 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	PFKFB4	Q16877	469 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	ATP13A5	Q4VNC0	1218 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	HSP90AA5P	Q58FG0	334 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	GPRC6A	Q5T6X5	926 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	TEDDM1	Q5T9Z0	273 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	AGAP9	Q5VTM2	703 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	ZNF470	Q6ECI4	717 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	KIRREL2	Q6UWL6	708 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	ADGRG6	Q86SQ4	1221 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	LRRTM4	Q86VH4	590 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	SERPINA9	Q86WD7	417 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	TRAPPC5	Q8IUR0	188 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	C10orf67	Q8IYJ2	551 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	ARIH2OS	Q8N7S6	290 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	OR10Q1	Q8NGQ4	319 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	TRIM63	Q969Q1	353 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	CXorf40B	Q96DE9	158 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	AJUBA	Q96IF1	538 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	PANX3	Q96QZ0	392 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	CPNE1	Q99829	537 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	WDR83	Q9BRX9	315 aa	Known RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	ROPN1B	Q9BZX4	212 aa	Predicted RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	ROPN1	Q9HAT0	212 aa	Predicted RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	PPAN	Q9NQ55	473 aa	Known RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	CPSF2	Q9P2I0	782 aa	Known RBP	6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	GRHPR	Q9UBQ7	328 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	SLC23A2	Q9UGH3	650 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	SLC23A1	Q9UHI7	598 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	GNPTG	Q9UJJ9	305 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	FBXO5	Q9UKT4	447 aa		6.25	□□□□□ -1.41
LDHA-223	ENST00000545215	EXOC1L	A0A1B0GW35	172 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	OR5H15	A6NDH6	313 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	CHUK	O15111	745 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	UGT1A9	O60656	530 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	BANF1	O75531	89 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	ACSL3	O95573	720 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	PLA2G1B	P04054	148 aa	Known RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	JUN	P05412	331 aa	Known RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	INHBA	P08476	426 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	DHRS4L1	P0CG22	281 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	ATP1B2	P14415	290 aa	Predicted RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	XRCC1	P18887	633 aa	Predicted RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	UGT1A6	P19224	532 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	CD9	P21926	228 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	UGT1A1	P22309	533 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	SSTR1	P30872	391 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	AKT1	P31749	480 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	SPR	P35270	261 aa	Predicted RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	SKIV2L2	P42285	1042 aa	Known RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	KCNJ5	P48544	419 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	GP2	P55259	537 aa	Known RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	PPP1CA	P62136	330 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	ACTG1	P63261	375 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	TMEM115	Q12893	351 aa	Predicted RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	PTPRCAP	Q14761	206 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	CLEC12B	Q2HXU8	276 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	FAM153C	Q494X1	144 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	GAGE13	Q4V321	117 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	BCL7A	Q4VC05	210 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	ZNF789	Q5FWF6	425 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	ZNF766	Q5HY98	468 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	GRTP1	Q5TC63	336 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	LRRC8E	Q6NSJ5	796 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	UGT3A1	Q6NUS8	523 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	CES3	Q6UWW8	571 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	CTAGE3P	Q8IX95	158 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	PIANP	Q8IYJ0	282 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	RIBC1	Q8N443	379 aa	Predicted RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	UBLCP1	Q8WVY7	318 aa	Predicted RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	SMPDL3B	Q92485	455 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	LPGAT1	Q92604	370 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	KCNJ9	Q92806	393 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	VPS39	Q96JC1	886 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	LINC00615	Q96LM1	132 aa	Predicted RBP	6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	TIMM29	Q9BSF4	260 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	ZNF747	Q9BV97	191 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	OR10A2	Q9H208	303 aa		6.24	□□□□□ -1.41
LDHA-223	ENST00000545215	RHOJ	Q9H4E5	214 aa		6.24	□□□□□ -1.41

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