RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CENPHQ9H3R5 247 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 PFDN4Q9NQP4 134 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 GIMAP4Q9NUV9 329 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 UTS2RQ9UKP6 389 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 RELNP78509 3460 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 PRRC2CQ9Y520 2896 aaKnown RBP14.56□□□□□ -0.08
CCDC78-216ENST00000544996 C2orf92A0A1B0GVN3 265 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 A0A1W2PS29 197 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 NPIPA5E9PKD4 350 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 SLC28A1O00337 649 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 AZIN1O14977 448 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 CTIFO43310 598 aaKnown RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 ERLIN1O75477 346 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 ATP1B1P05026 303 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 IL3P08700 152 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 SSTR4P31391 388 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 FUT7Q11130 342 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 EBPQ15125 230 aaKnown RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 ZNF750Q32MQ0 723 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 C4orf17Q53FE4 359 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 CEP85LQ5SZL2 805 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 DND1Q8IYX4 353 aaKnown RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 LRRC25Q8N386 305 aaPredicted RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 VWA5B2Q8N398 1253 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 GOLM1Q8NBJ4 401 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 FAM76AQ8TAV0 307 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 C11orf24Q96F05 449 aaPredicted RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 METTL2AQ96IZ6 378 aaKnown RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 GPR137Q96N19 417 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 MECRQ9BV79 373 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 BRINP2Q9C0B6 783 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 TSPAN10Q9H1Z9 355 aaPredicted RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 OR10A5Q9H207 317 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 TNFRSF12AQ9NP84 129 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 HEY2Q9UBP5 337 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 ERRFI1Q9UJM3 462 aaPredicted RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 NPIPA1Q9UND3 350 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 CFL2Q9Y281 166 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 WBP11Q9Y2W2 641 aaKnown RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 FIS1Q9Y3D6 152 aa14.55□□□□□ -0.08
CCDC78-216ENST00000544996 RP1L1Q8IWN7 2480 aaPredicted RBP14.55□□□□□ -0.08
CCDC78-216ENST00000544996 A0A1B0GUH1 482 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 LRRTM2O43300 516 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 RGS14O43566 566 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 TYROBPO43914 113 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 SEC22BO75396 215 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 P04436 131 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 STSP08842 583 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 MYZAPP0CAP1 466 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 CREB1P16220 341 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 SERPINB5P36952 375 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 CASP6P55212 293 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 PER3P56645 1201 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 GPR85P60893 370 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 ZNF763Q0D2J5 394 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 MAP4K2Q12851 820 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 ARL13AQ5H913 290 aaPredicted RBP14.54□□□□□ -0.08
CCDC78-216ENST00000544996 CDC26Q8NHZ8 85 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 TP53INP1Q96A56 240 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 EXOSC8Q96B26 276 aaKnown RBP14.54□□□□□ -0.08
CCDC78-216ENST00000544996 SSU72Q9NP77 194 aaKnown RBP14.54□□□□□ -0.08
CCDC78-216ENST00000544996 SACM1LQ9NTJ5 587 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 EHD3Q9NZN3 535 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 ENTPD4Q9Y227 616 aa14.54□□□□□ -0.08
CCDC78-216ENST00000544996 CAPN14A8MX76 684 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 TFECO14948 347 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-216ENST00000544996 ASNA1O43681 348 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 CLPSP04118 112 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 CHRNGP07510 517 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 BPGMP07738 259 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 FGF4P08620 206 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 CT62P0C5K7 136 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 NEFHP12036 1026 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 DDCP20711 480 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 NRG3P56975 720 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 C2orf80Q0P641 193 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 PRICKLE4Q2TBC4 344 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 KANK2Q63ZY3 851 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 NOXRED1Q6NXP6 359 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 BNC2Q6ZN30 1099 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-216ENST00000544996 GK5Q6ZS86 529 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 RNF165Q6ZSG1 346 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 FAM47EQ6ZV65 393 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 CLYBLQ8N0X4 340 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 ZNF615Q8N8J6 731 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 ZFP62Q8NB50 900 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-216ENST00000544996 PPP1R14CQ8TAE6 165 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 SPACA9Q96E40 222 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-216ENST00000544996 CNRIP1Q96F85 164 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-216ENST00000544996 MAGED4Q96JG8 741 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 ZNF681Q96N22 645 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 ZIM3Q96PE6 472 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 MIEF1Q9NQG6 463 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 C1orf109Q9NX04 203 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 BCAP29Q9UHQ4 241 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 TRAF6Q9Y4K3 522 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 POLR3HQ9Y535 204 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-216ENST00000544996 ESPL1Q14674 2120 aa14.53□□□□□ -0.08
CCDC78-216ENST00000544996 TRGV8A0A0C4DH27 118 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 ACOT7O00154 380 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms