RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 TRBV5-3A0A0A0MS03 114 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 TRIM64A6NGJ6 449 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 ADH1AP07327 375 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 IFNGR2P38484 337 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 RPS25P62851 125 aaKnown RBP12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 FADDQ13158 208 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 E2F2Q14209 437 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 PODNL1Q6PEZ8 512 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 VASH1Q7L8A9 365 aaPredicted RBP12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 CBARPQ8N350 705 aaPredicted RBP12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 OR8K5Q8NH50 307 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 OR52P1PQ8NH57 321 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 ASB15Q8WXK1 588 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 ZNF566Q969W8 418 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 QRFPRQ96P65 431 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 HOXD1Q9GZZ0 328 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 C11orf54Q9H0W9 315 aaPredicted RBP12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 PLXNA1Q9UIW2 1896 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 ADAM30Q9UKF2 790 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 RNASET2O00584 256 aaKnown RBP12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 REM1O75628 298 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 RAB36O95755 333 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 UQCRC2P22695 453 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 ACVR1BP36896 505 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 MAGEA2P43356 314 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 MAP2K3P46734 347 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 SLC6A12P48065 614 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 DCDC1P59894 354 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 PRKCDQ05655 676 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 LRRC32Q14392 662 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 MZT2AQ6P582 158 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 FAHD1Q6P587 224 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 NXPE4Q6UWF7 544 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 AMIGO1Q86WK6 493 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 ZNF557Q8N988 423 aaPredicted RBP12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 OR2A12Q8NGT7 310 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 LILRB4Q8NHJ6 448 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 CLIP3Q96DZ5 547 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 CTRCQ99895 268 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 FAIM2Q9BWQ8 316 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 EXTL2Q9UBQ6 330 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 GREB1Q4ZG55 1949 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 ZNF860A6NHJ4 632 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 C12orf71A8MTZ7 269 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 SMSP52788 366 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 METAP1P53582 386 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 FAM46CQ5VWP2 391 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 HOMEZQ8IX15 550 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 SAMD12Q8N8I0 201 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 UBTD2Q8WUN7 234 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 SMPDL3AQ92484 453 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 ECHDC3Q96DC8 303 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 CWH43Q9H720 699 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 MGAT4BQ9UQ53 548 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 PLXNB2O15031 1838 aa12.56□□□□□ -0.4
PCMTD1-208ENST00000544451 BPTFQ12830 3046 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 ANKRD34BA5PLL1 514 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 ZSCAN5BA6NJL1 495 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 NDUFS4O43181 175 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 PRKYO43930 277 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 CXCR2P25025 360 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 ANXA11P50995 505 aaKnown RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 PPP2R2DQ66LE6 453 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 SLCO4C1Q6ZQN7 724 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 GRASPQ7Z6J2 395 aaPredicted RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 OR51L1Q8NGJ5 315 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 SNAPC3Q92966 411 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 ELAC1Q9H777 363 aaKnown RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 TM7SF3Q9NS93 570 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 PADI2Q9Y2J8 665 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 HYAL3O43820 417 aaPredicted RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 NOS1APO75052 506 aaPredicted RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 OR2B3O76000 313 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 FURINP09958 794 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 RPL6Q02878 288 aaKnown RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 TGM3Q08188 693 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 RBBP4Q09028 425 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 INSL4Q14641 139 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 TATDN3Q17R31 274 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 NUDT13Q86X67 352 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 BEST4Q8NFU0 473 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 SLC7A13Q8TCU3 470 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 EFHD2Q96C19 240 aaPredicted RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 MVB12BQ9H7P6 319 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 SRRDQ9UH36 339 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 BRCA1P38398 1863 aaKnown RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 PSME4Q14997 1843 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 INMT-MINDY4F8WBC2 141 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 J3QLW9 94 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 PGRMC2O15173 223 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 SLC31A1O15431 190 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 EEF1E1O43324 174 aaKnown RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 ORC5O43913 435 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 PAK4O96013 591 aaPredicted RBP12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 ZNF19P17023 458 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 HOXC8P31273 242 aa12.55□□□□□ -0.4
PCMTD1-208ENST00000544451 MTNR1AP48039 350 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms