RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 BHLHE41Q9C0J9 482 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GLIPR2Q9H4G4 154 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CLMPQ9H6B4 373 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZIM2Q9NZV7 527 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 COPG1Q9Y678 874 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TRBV11-1A0A0K0K1C0 115 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ITGB2P05107 769 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SERPINA7P05543 415 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CT62P0C5K7 136 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 S100A3P33764 101 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GPC1P35052 558 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CLCN2P51788 898 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 IRX1P78414 480 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MRPS35P82673 323 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SQLEQ14534 574 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TBR1Q16650 682 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MPEG1Q2M385 716 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SPANXN4Q5MJ08 99 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 METTL21CQ5VZV1 264 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR4F3Q6IEY1 312 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PAOXQ6QHF9 649 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 FAM111BQ6SJ93 734 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CAMKMTQ7Z624 323 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 APLFQ8IW19 511 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 VWA5B2Q8N398 1253 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 KIF2BQ8N4N8 673 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GLB1L3Q8NCI6 653 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR9I1Q8NGQ6 314 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR1N1Q8NGS0 311 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SUN3Q8TAQ9 357 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 FBXL20Q96IG2 436 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 AMDHD1Q96NU7 426 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ARHGAP9Q9BRR9 750 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 LHPPQ9H008 270 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 EPN3Q9H201 632 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MMP25Q9NPA2 562 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MAT2BQ9NZL9 334 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MED13Q9UHV7 2174 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 A0A1W2PRB8 838 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 HRKO00198 91 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CFLARO15519 480 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DDAH2O95865 285 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ITGAMP11215 1152 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GPX3P22352 226 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 IL12AP29459 219 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ATP4BP51164 291 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MAP4K2Q12851 820 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 RAPSNQ13702 412 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF551Q7Z340 670 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF321PQ8N8H1 164 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 VPS37AQ8NEZ2 397 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR8J2Q8NGG1 315 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 BRIX1Q8TDN6 353 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ELP5Q8TE02 316 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF721Q8TF20 911 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 KAT2AQ92830 837 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MAGED4Q96JG8 741 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SLAMF7Q9NQ25 335 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ACSS1Q9NUB1 689 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CCDC167Q9P0B6 97 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 BCAP29Q9UHQ4 241 aa13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PPIEQ9UNP9 301 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PTPRQQ9UMZ3 2332 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ACACBO00763 2458 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TPRP12270 2363 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 A8MUI8 341 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SNX3O60493 162 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PGRP06401 933 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SSTR4P31391 388 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 FRKP42685 505 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MRPL19P49406 292 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GPR143P51810 404 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 POLR2JP52435 117 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DGKQP52824 942 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TRMT12Q53H54 448 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF628Q5EBL2 1059 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TMEM107Q6UX40 140 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 RNF111Q6ZNA4 994 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR52E6Q96RD3 313 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 NUDT9Q9BW91 350 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DEFB126Q9BYW3 111 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GPR83Q9NYM4 423 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PTGFRNQ9P2B2 879 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PCDHGB4Q9UN71 923 aa13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MAP1BP46821 2468 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DOCK10Q96BY6 2186 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CFAP47Q6ZTR5 3102 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 FAM234BA2RU67 622 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 RNASET2O00584 256 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SLITRK5O94991 958 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 C6orf47O95873 294 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 IGKV3-11P04433 115 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 IL6P05231 212 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ABCB1P08183 1280 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MC3RP41968 323 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 POLE2P56282 527 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms