RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 GARNL3Q5VVW2 1013 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 TMEM179BQ7Z7N9 219 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 STK32CQ86UX6 486 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 CHERPQ8IWX8 916 aaKnown RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 Q8N9G6 341 aaPredicted RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 TTC29Q8NA56 475 aaPredicted RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 NUP43Q8NFH3 380 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 MAGEE2Q8TD90 523 aaPredicted RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 LZICQ8WZA0 190 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 TFAP2CQ92754 450 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 VNN3Q9NY84 501 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 SEMA5BQ9P283 1151 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 P2RX2Q9UBL9 471 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 TRPC4Q9UBN4 977 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 RAB23Q9ULC3 237 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 PADI2Q9Y2J8 665 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 A0A0A6YYC8 382 aaPredicted RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 HYKKA2RU49 373 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 FITM1A5D6W6 292 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 MAGEA13PA6NCF6 341 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 I3L1I5 382 aaPredicted RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 PLOD2O00469 737 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 GPR75O95800 540 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 UBTFL6P0CB48 400 aaPredicted RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 ALDH3A2P51648 485 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 SKP1P63208 163 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 TXNL4AP83876 142 aaKnown RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 ID2Q02363 134 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 IFI44LQ53G44 452 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 NIPAL1Q6NVV3 410 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 UGT2A3Q6UWM9 527 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 TSEN54Q7Z6J9 526 aaKnown RBP18.63■□□□□ 0.57
COPS7A-218ENST00000543939 OR7G2Q8NG99 324 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 XAGE5Q8WWM1 108 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 GIMAP5Q96F15 307 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 UBAP1Q9NZ09 502 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 BAG5Q9UL15 447 aa18.63■□□□□ 0.57
COPS7A-218ENST00000543939 DPM1O60762 260 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 LDB3O75112 727 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 NSA2O95478 260 aaKnown RBP18.62■□□□□ 0.57
COPS7A-218ENST00000543939 HPRP00739 348 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 ALPLP05186 524 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 ITGA1P56199 1179 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 BLMHQ13867 455 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 CEP68Q76N32 757 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 CARM1Q86X55 608 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 ARMC8Q8IUR7 673 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 SLC44A2Q8IWA5 706 aaPredicted RBP18.62■□□□□ 0.57
COPS7A-218ENST00000543939 LGI4Q8N135 537 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 OR4C6Q8NH72 309 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 COL26A1Q96A83 441 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 SDCCAG3Q96C92 435 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 C16orf58Q96GQ5 468 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 CNBD2Q96M20 576 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 YIPF4Q9BSR8 244 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 ANKRA2Q9H9E1 313 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 ENAMQ9NRM1 1142 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 SMPD3Q9NY59 655 aaPredicted RBP18.62■□□□□ 0.57
COPS7A-218ENST00000543939 TMEM9Q9P0T7 183 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 CLCA2Q9UQC9 943 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 ZDBF2Q9HCK1 2354 aa18.62■□□□□ 0.57
COPS7A-218ENST00000543939 TMEM247A6NEH6 219 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 EIF4E1BA6NMX2 242 aaKnown RBP18.61■□□□□ 0.57
COPS7A-218ENST00000543939 SLC28A2O43868 658 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 E2F6O75461 281 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 PDE9AO76083 593 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 DIRAS1O95057 198 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 ATP1B1P05026 303 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 LYNP07948 512 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 SOX18P35713 384 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 MAN2A2P49641 1150 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 HSD11B2P80365 405 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 MRPS35P82673 323 aaKnown RBP18.61■□□□□ 0.57
COPS7A-218ENST00000543939 PPP1R8Q12972 351 aaKnown RBP18.61■□□□□ 0.57
COPS7A-218ENST00000543939 SYPL1Q16563 259 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 ZNF628Q5EBL2 1059 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 WDR74Q6RFH5 385 aaPredicted RBP18.61■□□□□ 0.57
COPS7A-218ENST00000543939 HS3ST5Q8IZT8 346 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 OR2L13Q8N349 312 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 SPPL2AQ8TCT8 520 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 CCDC74AQ96AQ1 378 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 ANKRD9Q96BM1 317 aaPredicted RBP18.61■□□□□ 0.57
COPS7A-218ENST00000543939 ADI1Q9BV57 179 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 SPRTNQ9H040 489 aaPredicted RBP18.61■□□□□ 0.57
COPS7A-218ENST00000543939 USE1Q9NZ43 259 aa18.61■□□□□ 0.57
COPS7A-218ENST00000543939 LY6G6EA0A0G2JKS1 128 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 PRAMEF25A6NGN4 478 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 H3BMH7 237 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 YKT6O15498 198 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 MFN2O95140 757 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 CFIP05156 583 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 PNLIPP16233 465 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 CNR2P34972 360 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 HOXD12P35452 270 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 EMP3P54852 163 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 PPP2R2BQ00005 443 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 MERTKQ12866 999 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 GK3PQ14409 553 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 KCNAB1Q14722 419 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms