RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 SNRPB2P08579 225 aaKnown RBP9.48□□□□□ -0.89
CPSF7-221ENST00000543545 ICAM2P13598 275 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 GALNSP34059 522 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 SOAT1P35610 550 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 MRPL19P49406 292 aaKnown RBP9.48□□□□□ -0.89
CPSF7-221ENST00000543545 RRADP55042 308 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 TMPRSS3P57727 454 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 SLC26A5P58743 744 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 CXADRP78310 365 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 MRPS35P82673 323 aaKnown RBP9.48□□□□□ -0.89
CPSF7-221ENST00000543545 VAC14Q08AM6 782 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 PCOLCEQ15113 449 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 MAPRE2Q15555 327 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 EXT1Q16394 746 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 MAPKAPK3Q16644 382 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 MPEG1Q2M385 716 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 DCAF10Q5QP82 559 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 C6orf10Q5SRN2 563 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 IRAK1BP1Q5VVH5 260 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 BLOC1S3Q6QNY0 202 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 TMEM107Q6UX40 140 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 DGAT2L6Q6ZPD8 337 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 GK5Q6ZS86 529 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 CAMKMTQ7Z624 323 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 FUNDC1Q8IVP5 155 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 CLECL1Q8IZS7 167 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 VWA5B2Q8N398 1253 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 KDF1Q8NAX2 398 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-221ENST00000543545 CLEC1AQ8NC01 280 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 MORN4Q8NDC4 146 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 OR8J2Q8NGG1 315 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 ADAMTS17Q8TE56 1095 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 VPS33AQ96AX1 596 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 SPDL1Q96EA4 605 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 ART5Q96L15 291 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 LRRC37BQ96QE4 947 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 WDR77Q9BQA1 342 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-221ENST00000543545 ZNF385DQ9H6B1 395 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 ATP13A2Q9NQ11 1180 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 SLAMF7Q9NQ25 335 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 DDX18Q9NVP1 670 aaKnown RBP9.48□□□□□ -0.89
CPSF7-221ENST00000543545 FAM120CQ9NX05 1096 aaKnown RBP9.48□□□□□ -0.89
CPSF7-221ENST00000543545 ERVK-19Q9WJR5 959 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 CEP295Q9C0D2 2601 aa9.48□□□□□ -0.89
CPSF7-221ENST00000543545 A0A087WV48 116 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 TRBV11-1A0A0K0K1C0 115 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 A6NL46 340 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 A8MUI8 341 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 HRKO00198 91 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 RFXANKO14593 260 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 ANGPT2O15123 496 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 CT62P0C5K7 136 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 ITGA3P26006 1051 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 ADSLP30566 484 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-221ENST00000543545 SSTR4P31391 388 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 MC3RP41968 323 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 CDK9P50750 372 aaKnown RBP9.47□□□□□ -0.89
CPSF7-221ENST00000543545 CCL11P51671 97 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 CLCN2P51788 898 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 PRKAG1P54619 331 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 WNT3P56703 355 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 AP2B1P63010 937 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 PHC1P78364 1004 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 LRRC74AQ0VAA2 488 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 MAP4K2Q12851 820 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 CHAF1BQ13112 559 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 CYLC2Q14093 348 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-221ENST00000543545 TERF2Q15554 542 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 CEBPEQ15744 281 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 PRICKLE4Q2TBC4 344 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 MMEL1Q495T6 779 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 CRTC2Q53ET0 693 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-221ENST00000543545 TRMT12Q53H54 448 aaKnown RBP9.47□□□□□ -0.89
CPSF7-221ENST00000543545 ZNF628Q5EBL2 1059 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 RNF111Q6ZNA4 994 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 ZNF621Q6ZSS3 439 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 KBTBD2Q8IY47 623 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 TMEM102Q8N9M5 508 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-221ENST00000543545 B3GNT7Q8NFL0 401 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 OR52R1Q8NGF1 315 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 SUN3Q8TAQ9 357 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 M1APQ8TC57 530 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 SLC2A12Q8TD20 617 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 NCLNQ969V3 563 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 VMP1Q96GC9 406 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 ITCHQ96J02 903 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 IMMP1LQ96LU5 166 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 PANX1Q96RD7 426 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 DEFB126Q9BYW3 111 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 ING2Q9H160 280 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 C3orf14Q9HBI5 128 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.47□□□□□ -0.89
CPSF7-221ENST00000543545 MAT2BQ9NZL9 334 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 ZMIZ1Q9ULJ6 1067 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 NDUFAF1Q9Y375 327 aa9.47□□□□□ -0.89
CPSF7-221ENST00000543545 A0A1W2PP18 115 aa9.46□□□□□ -0.9
CPSF7-221ENST00000543545 DYTNA2CJ06 578 aa9.46□□□□□ -0.9
CPSF7-221ENST00000543545 K7ENP7 123 aa9.46□□□□□ -0.9
CPSF7-221ENST00000543545 SLC22A2O15244 555 aa9.46□□□□□ -0.9
CPSF7-221ENST00000543545 EMC8O43402 210 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms