RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 ZBTB9Q96C00 473 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 KIRREL1Q96J84 757 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 OR6C1Q96RD1 312 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 NR1H4Q96RI1 486 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 SMC6Q96SB8 1091 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 CTRCQ99895 268 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 DPH7Q9BTV6 452 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 SGPP1Q9BX95 441 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 STMN4Q9H169 189 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 HEYLQ9NQ87 328 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 FBXO8Q9NRD0 319 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 C6orf203Q9P0P8 240 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 ANKMY1Q9P2S6 941 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 XPR1Q9UBH6 696 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 ZMAT5Q9UDW3 170 aaKnown RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 RARRES3Q9UL19 164 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 GRID1Q9ULK0 1009 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 SNX7Q9UNH6 387 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 SLC22A14Q9Y267 594 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 KCNE2Q9Y6J6 123 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 UQCRHLA0A096LP55 91 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 PMS2P1A4D2B8 440 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 TMEM150CB9EJG8 249 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 F2RL2O00254 374 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 TAPBPO15533 448 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 ZZEF1O43149 2961 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SLC25A17O43808 307 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 PRAMEF10O60809 474 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 OR2C1O95371 312 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 UQCRHP07919 91 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SPARCP09486 303 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 CDH1P12830 882 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SELLP14151 372 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 H2AFXP16104 143 aaPredicted RBP4.84□□□□□ -1.64
CLIP1-217ENST00000543205 PRKCAP17252 672 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 CCNA2P20248 432 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 ETV5P41161 510 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 GDF5P43026 501 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SLC6A12P48065 614 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 CCR8P51685 355 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SLC18A2Q05940 514 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 RCN2Q14257 317 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 IL11RAQ14626 422 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 KIR3DS1Q14943 382 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 RTP5Q14D33 572 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 ZIC1Q15915 447 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 PDK4Q16654 411 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 CCDC153Q494R4 210 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 FBXO48Q5FWF7 155 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 FCRL6Q6DN72 434 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 FAM111BQ6SJ93 734 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 CDHR3Q6ZTQ4 885 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.84□□□□□ -1.64
CLIP1-217ENST00000543205 TBC1D19Q8N5T2 526 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 CCDC63Q8NA47 563 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 OR8K5Q8NH50 307 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 KCNE4Q8WWG9 221 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SLC5A11Q8WWX8 675 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 ESAMQ96AP7 390 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 PHF21BQ96EK2 531 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SLC46A1Q96NT5 459 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 PRAP1Q96NZ9 151 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 TEFMQ96QE5 360 aaKnown RBP4.84□□□□□ -1.64
CLIP1-217ENST00000543205 TMEM79Q9BSE2 394 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 DDA1Q9BW61 102 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 CAPS2Q9BXY5 557 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 CHRNA10Q9GZZ6 450 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 FAM60AQ9NP50 221 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SLC6A20Q9NP91 592 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 ASH1LQ9NR48 2969 aaKnown RBP4.84□□□□□ -1.64
CLIP1-217ENST00000543205 THSD1Q9NS62 852 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 FGF21Q9NSA1 209 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 TMEM184CQ9NVA4 438 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 DNAJC11Q9NVH1 559 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SIDT1Q9NXL6 827 aaKnown RBP4.84□□□□□ -1.64
CLIP1-217ENST00000543205 TMEM216Q9P0N5 145 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SENP1Q9P0U3 644 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 OPTCQ9UBM4 332 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 SERTAD3Q9UJW9 196 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 PLCL2Q9UPR0 1127 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 KLK4Q9Y5K2 254 aa4.84□□□□□ -1.64
CLIP1-217ENST00000543205 UNC13CQ8NB66 2214 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 IGKV1-8A0A0C4DH67 115 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 A0A0J9YVX5 310 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 A0A1W2PNU3 283 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-217ENST00000543205 LIPT2A6NK58 231 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 RAB27BO00194 218 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 PGRMC2O15173 223 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 KLK8O60259 260 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 AMY1AP04745 511 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 MYL2P10916 166 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 FGF5P12034 268 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 EZRP15311 586 aaKnown RBP4.83□□□□□ -1.64
CLIP1-217ENST00000543205 GNAZP19086 355 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 PTAFRP25105 342 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 SLC5A2P31639 672 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 CPA2P48052 419 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 AGTR2P50052 363 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 ITGA1P56199 1179 aa4.83□□□□□ -1.64
CLIP1-217ENST00000543205 YBX1P67809 324 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms