RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SSX6Q7RTT6 188 aa12.54□□□□□ -0.4
TNC-212ENST00000542877 TMPRSS12Q86WS5 348 aa12.54□□□□□ -0.4
TNC-212ENST00000542877 METTL25Q8N6Q8 603 aa12.54□□□□□ -0.4
TNC-212ENST00000542877 HUS1BQ8NHY5 278 aa12.54□□□□□ -0.4
TNC-212ENST00000542877 CCDC86Q9H6F5 360 aaKnown RBP12.54□□□□□ -0.4
TNC-212ENST00000542877 TMEM185BQ9H7F4 350 aa12.54□□□□□ -0.4
TNC-212ENST00000542877 MVB12BQ9H7P6 319 aa12.54□□□□□ -0.4
TNC-212ENST00000542877 CUEDC1Q9NWM3 386 aaPredicted RBP12.54□□□□□ -0.4
TNC-212ENST00000542877 HSPA12AO43301 675 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 UCHL1P09936 223 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 H2BFMP0C1H6 154 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 NAA10P41227 235 aaPredicted RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 MTNR1AP48039 350 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 PGGT1BP53609 377 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 CHRFAM7AQ494W8 412 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 MANEALQ5VSG8 457 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 HMBOX1Q6NT76 420 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 GDPGP1Q6ZNW5 385 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 ZNF283Q8N7M2 679 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 PAPD5Q8NDF8 572 aaKnown RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 SH3YL1Q96HL8 342 aaPredicted RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 SLC2A4RGQ9NR83 387 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 AK4P27144 223 aaPredicted RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 SGTBQ96EQ0 304 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 IGSF21Q96ID5 467 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 NEDD4LQ96PU5 975 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 OR2M4Q96R27 311 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 TSNAXQ99598 290 aaKnown RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 NPLQ9BXD5 320 aaPredicted RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 ARL6Q9H0F7 186 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 KLHL21Q9UJP4 597 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 C12orf71A8MTZ7 269 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 NFKBIEO00221 500 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 CAPN3P20807 821 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 CBLP22681 906 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 CLRN1P58418 232 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 ERVPABLB-1P60509 514 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 COL28A1Q2UY09 1125 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 LRRC37A5PQ49AS3 106 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 UNC5DQ6UXZ4 953 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 NPWQ8N729 165 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 MAPK15Q8TD08 544 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 CNN2Q99439 309 aaKnown RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 URM1Q9BTM9 101 aaKnown RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 CACNG6Q9BXT2 260 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 TLR9Q9NR96 1032 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 EPHA6Q9UF33 1036 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 FUOMA2VDF0 154 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 ANHXE9PGG2 379 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 ACVR1BP36896 505 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 KEAP1Q14145 624 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 GK3PQ14409 553 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 RANBP10Q6VN20 620 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 GRASPQ7Z6J2 395 aaPredicted RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 VTCN1Q7Z7D3 282 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 MAFIPQ8WZ33 124 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 F2RL3Q96RI0 385 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 HERPUD2Q9BSE4 406 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 DPCDQ9BVM2 203 aaPredicted RBP12.53□□□□□ -0.4
TNC-212ENST00000542877 STRA6Q9BX79 667 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 SPHK2Q9NRA0 654 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 HRASLS2Q9NWW9 162 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 ZDHHC7Q9NXF8 308 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 ENPP4Q9Y6X5 453 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 MYH2Q9UKX2 1941 aa12.53□□□□□ -0.4
TNC-212ENST00000542877 CPED1A4D0V7 1026 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 H7C417 338 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 ZNF623O75123 536 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 JRKO75564 520 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 OSMP13725 252 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.4
TNC-212ENST00000542877 PPP2R2DQ66LE6 453 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 GATA6Q92908 595 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 RXFP3Q9NSD7 469 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 TMEM181Q9P2C4 612 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 A0A1W2PPL8 197 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 H3BMQ9 156 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 FGF18O76093 207 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 KLK3P07288 261 aaPredicted RBP12.52□□□□□ -0.4
TNC-212ENST00000542877 ETFAP13804 333 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 FOSL2P15408 326 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 SOX9P48436 509 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 SLC22A10Q63ZE4 541 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 PM20D1Q6GTS8 502 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 OR52E8Q6IFG1 317 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 SYNPOQ8N3V7 929 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 SLC5A8Q8N695 610 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 COG8Q96MW5 612 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 PELOQ9BRX2 385 aaKnown RBP12.52□□□□□ -0.4
TNC-212ENST00000542877 OR10A4Q9H209 315 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 TAS2R8Q9NYW2 309 aa12.52□□□□□ -0.4
TNC-212ENST00000542877 NUFIP1Q9UHK0 495 aaKnown RBP12.52□□□□□ -0.4
TNC-212ENST00000542877 GMPRP36959 345 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 S100A12P80511 92 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 GNMTQ14749 295 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 EIF4HQ15056 248 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms