RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 PRICKLE4Q2TBC4 344 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 DEFB109BQ30KR1 87 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 PLAG1Q6DJT9 500 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 OR4F3Q6IEY1 312 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 CLEC1AQ8NC01 280 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 VPS37AQ8NEZ2 397 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 B3GNT7Q8NFL0 401 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 OR9I1Q8NGQ6 314 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 M1APQ8TC57 530 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 ART5Q96L15 291 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 GLIPR2Q9H4G4 154 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 ATP13A2Q9NQ11 1180 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 SLAMF7Q9NQ25 335 aa15.98■□□□□ 0.15
LIG1-204ENST00000542460 A0A1W2PRB8 838 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 FAM234BA2RU67 622 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 SLITRK5O94991 958 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 PGRP06401 933 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 ZFP36L2P47974 494 aaKnown RBP15.97■□□□□ 0.15
LIG1-204ENST00000542460 AP2B1P63010 937 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 AIMP2Q13155 320 aaKnown RBP15.97■□□□□ 0.15
LIG1-204ENST00000542460 ZNF267Q14586 743 aaPredicted RBP15.97■□□□□ 0.15
LIG1-204ENST00000542460 BTBD16Q32M84 506 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 GKAP1Q5VSY0 366 aaPredicted RBP15.97■□□□□ 0.15
LIG1-204ENST00000542460 ANXA8L1Q5VT79 327 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 ADCY4Q8NFM4 1077 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 OR9A2Q8NGT5 310 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 ZNF675Q8TD23 568 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 SENP5Q96HI0 755 aaPredicted RBP15.97■□□□□ 0.15
LIG1-204ENST00000542460 FBXL20Q96IG2 436 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 OR8D2Q9GZM6 311 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 SAR1AQ9NR31 198 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 CCDC167Q9P0B6 97 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 SCN2AQ99250 2005 aa15.97■□□□□ 0.15
LIG1-204ENST00000542460 PRSS51A0A1B0GVH4 220 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 C9JVG2 144 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 RNASET2O00584 256 aaKnown RBP15.96■□□□□ 0.15
LIG1-204ENST00000542460 CCDC22O60826 627 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 DDAH2O95865 285 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 GPR143P51810 404 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 DGKQP52824 942 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 WNT3P56703 355 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 PHC1P78364 1004 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 MGAT2Q10469 447 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 LTB4RQ15722 352 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 AGKQ53H12 422 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 ZNF628Q5EBL2 1059 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 BLOC1S3Q6QNY0 202 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 ZNF551Q7Z340 670 aaPredicted RBP15.96■□□□□ 0.15
LIG1-204ENST00000542460 FUNDC1Q8IVP5 155 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 KBTBD2Q8IY47 623 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 VWA5B2Q8N398 1253 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 OR1N1Q8NGS0 311 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 SLC2A12Q8TD20 617 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 OR5P2Q8WZ92 322 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 CTHRC1Q96CG8 243 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 ERP27Q96DN0 273 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 CNPPD1Q9BV87 410 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 ING2Q9H160 280 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 MMP25Q9NPA2 562 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 FAM120CQ9NX05 1096 aaKnown RBP15.96■□□□□ 0.15
LIG1-204ENST00000542460 MAT2BQ9NZL9 334 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 COPS7AQ9UBW8 275 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 LHX6Q9UPM6 363 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 ARL2BPQ9Y2Y0 163 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 KCNMB2Q9Y691 235 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 NBEAQ8NFP9 2946 aa15.96■□□□□ 0.15
LIG1-204ENST00000542460 FAM208BQ5VWN6 2430 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 MASP2O00187 686 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 SCN2BO60939 215 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 IGKV3-11P04433 115 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 SERPINA7P05543 415 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 CT62P0C5K7 136 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 ADSLP30566 484 aaPredicted RBP15.95■□□□□ 0.14
LIG1-204ENST00000542460 PTGER1P34995 402 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 SOX8P57073 446 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 KCNK10P57789 538 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 LRRC74AQ0VAA2 488 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 Q0VFX4 171 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 FUT7Q11130 342 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 HSPB3Q12988 150 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 RCAN2Q14206 197 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 C19orf48Q6RUI8 117 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 FAM111BQ6SJ93 734 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 APLFQ8IW19 511 aaPredicted RBP15.95■□□□□ 0.14
LIG1-204ENST00000542460 APCDD1LQ8NCL9 501 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 ELP5Q8TE02 316 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 DOK4Q8TEW6 326 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 ZNF721Q8TF20 911 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 APOBEC4Q8WW27 367 aaKnown RBP15.95■□□□□ 0.14
LIG1-204ENST00000542460 NCLNQ969V3 563 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 VMP1Q96GC9 406 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 OR52E6Q96RD3 313 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 SEMA4CQ9C0C4 833 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 NMUR2Q9GZQ4 415 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 ZNF639Q9UID6 485 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 PCDHGB4Q9UN71 923 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 ERVK-19Q9WJR5 959 aa15.95■□□□□ 0.14
LIG1-204ENST00000542460 DYTNA2CJ06 578 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 HRKO00198 91 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 PLOD2O00469 737 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms