RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 STAG3L1P0CL83 205 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 THRBP10828 461 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 AKR1A1P14550 325 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 MYOGP15173 224 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 NDUFB7P17568 137 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TSPAN8P19075 237 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 AMY2BP19961 511 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 NPR2P20594 1047 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 ITGA3P26006 1051 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 STOMP27105 288 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 GTF2E2P29084 291 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 CCR1P32246 355 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 PTPN7P35236 360 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 THBS4P35443 961 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 POLR2IP36954 125 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 MMP12P39900 470 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 ARL4AP40617 200 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 CDKN2CP42773 168 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 ID4P47928 161 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SLC1A6P48664 564 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 ATP4BP51164 291 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 IDH3GP51553 393 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 XKP51811 444 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 MAPK10P53779 464 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 EEFSECP57772 596 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 GMFBP60983 142 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 DYNLL1P63167 89 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 IRF9Q00978 393 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 EMX1Q04741 257 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 MBTD1Q05BQ5 628 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TNFRSF9Q07011 255 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 ITKQ08881 620 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TROAPQ12815 778 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 RPA4Q13156 261 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 DAG1Q14118 895 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 GK2Q14410 553 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 IRF4Q15306 451 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SMAD1Q15797 465 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 KCNMB1Q16558 191 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 KCTD19Q17RG1 926 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 FLYWCH1Q4VC44 716 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 EMC4Q5J8M3 183 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 CELF3Q5SZQ8 465 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 C9orf64Q5T6V5 341 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 N4BP2L1Q5TBK1 243 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 JADE1Q6IE81 842 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 FRMPD2BQ6IN97 320 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TAPT1Q6NXT6 567 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 JMJD6Q6NYC1 403 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 C1orf94Q6P1W5 598 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 FAM198BQ6UWH4 519 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 BAIAP2L2Q6UXY1 529 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 DLK2Q6UY11 383 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SPNS3Q6ZMD2 512 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TMPRSS11AQ6ZMR5 421 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 C3P1Q6ZMU1 363 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 C17orf107Q6ZR85 190 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 USP30Q70CQ3 517 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SLC16A13Q7RTY0 426 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TMC8Q8IU68 726 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SNX29P2Q8IUI4 249 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 STK40Q8N2I9 435 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 NKAPQ8N5F7 415 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 MS4A15Q8N5U1 240 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 PQLC3Q8N755 202 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF557Q8N988 423 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 NETO2Q8NC67 525 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 FAM83FQ8NEG4 500 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SEMA6DQ8NFY4 1073 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 OR8D4Q8NGM9 314 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 OR56A3Q8NH54 315 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 C9orf43Q8TAL5 461 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 LNX1Q8TBB1 728 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 PHOSPHO1Q8TCT1 267 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 CHTF18Q8WVB6 975 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 LCN9Q8WX39 176 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 AP3S1Q92572 193 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SLCO4A1Q96BD0 722 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 LRRC46Q96FV0 321 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 PPP1R36Q96LQ0 422 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 COQ10AQ96MF6 247 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 COL21A1Q96P44 957 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 LENG8Q96PV6 779 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 OR2M2Q96R28 347 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 GAD1Q99259 594 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 CITED2Q99967 270 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 WDR77Q9BQA1 342 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 EBF4Q9BQW3 602 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SYT11Q9BT88 431 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SF3B5Q9BWJ5 86 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SEMA4CQ9C0C4 833 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 MTIF3Q9H2K0 278 aaKnown RBP4.13□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF385DQ9H6B1 395 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TUBA4BQ9H853 241 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 SMURF1Q9HCE7 757 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 ZBTB26Q9HCK0 441 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TMEM138Q9NPI0 162 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TMLHEQ9NVH6 421 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 TMEM45AQ9NWC5 275 aa4.13□□□□□ -1.75
SNHG1-219ENST00000542112 OXSMQ9NWU1 459 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms