RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 GSTM2P28161 218 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 FMO4P31512 558 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 SCTRP47872 440 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 LHX2P50458 406 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 PDLIM4P50479 330 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 HNRNPH2P55795 449 aaKnown RBP8.51□□□□□ -1.05
YBX3-211ENST00000541351 EIF3EP60228 445 aaKnown RBP8.51□□□□□ -1.05
YBX3-211ENST00000541351 PLIN5Q00G26 463 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 KCNJ11Q14654 390 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 CYP1B1Q16678 543 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 IQCCQ4KMZ1 466 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 ACSBG2Q5FVE4 666 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 HLA-DQA1Q5Y7H0 255 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 E4F1Q66K89 784 aaPredicted RBP8.51□□□□□ -1.05
YBX3-211ENST00000541351 ALKBH2Q6NS38 261 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 SLC30A6Q6NXT4 461 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 AGTRAPQ6RW13 159 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 PPP1R21Q6ZMI0 780 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 STAC2Q6ZMT1 411 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 DEF8Q6ZN54 512 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 C22orf34Q6ZV56 151 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 MICALCLQ6ZW33 695 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 KIAA1328Q86T90 577 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 EXOC3L1Q86VI1 746 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 C9orf40Q8IXQ3 194 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 FAM47BQ8NA70 645 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 OR4K1Q8NGD4 311 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 OR6K3Q8NGY3 331 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 LILRB1Q8NHL6 650 aaPredicted RBP8.51□□□□□ -1.05
YBX3-211ENST00000541351 ZNF721Q8TF20 911 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 HSD17B8Q92506 261 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 SMIM10Q96HG1 83 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 SENP5Q96HI0 755 aaPredicted RBP8.51□□□□□ -1.05
YBX3-211ENST00000541351 HIST1H2AHQ96KK5 128 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 SFXN2Q96NB2 322 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 DGAT2Q96PD7 388 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 HIST1H2AJQ99878 128 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 H2AFJQ9BTM1 129 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 STMN4Q9H169 189 aaPredicted RBP8.51□□□□□ -1.05
YBX3-211ENST00000541351 CCDC68Q9H2F9 335 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 METTL7AQ9H8H3 244 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 MYOZ1Q9NP98 299 aaPredicted RBP8.51□□□□□ -1.05
YBX3-211ENST00000541351 CBLN4Q9NTU7 201 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 PCDHB10Q9UN67 800 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 CLDN16Q9Y5I7 305 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 FKBP7Q9Y680 259 aa8.51□□□□□ -1.05
YBX3-211ENST00000541351 YLPM1P49750 1951 aaKnown RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 H7C417 338 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 NIPSNAP2O75323 286 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 PLGP00747 810 aaPredicted RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 TMEM253P0C7T8 217 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 CETN2P41208 172 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 CASP3P42574 277 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 EFNA4P52798 201 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 CDH11P55287 796 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 CTBP2P56545 445 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 RPS3AP61247 264 aaKnown RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 LGALS3BPQ08380 585 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 SNTA1Q13424 505 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 NAE1Q13564 534 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 TOR1AIP1Q5JTV8 583 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 CTSL3PQ5NE16 218 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 TRIM40Q6P9F5 258 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 SHQ1Q6PI26 577 aaKnown RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 ANGPTL8Q6UXH0 198 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 RNF111Q6ZNA4 994 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 PEG10Q86TG7 708 aaKnown RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 FBXL14Q8N1E6 418 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 ZNF321PQ8N8H1 164 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 GBP7Q8N8V2 638 aaPredicted RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 PRELID2Q8N945 189 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 ACTL9Q8TC94 416 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 GFM2Q969S9 779 aaKnown RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 IQCDQ96DY2 449 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 FBXL20Q96IG2 436 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 BTBD9Q96Q07 612 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 SERINC2Q96SA4 455 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 PELOQ9BRX2 385 aaKnown RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 G6PC3Q9BUM1 346 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 TRIM2Q9C040 744 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 OR2B2Q9GZK3 357 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 ROGDIQ9GZN7 287 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 RNF122Q9H9V4 155 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 PLSCR4Q9NRQ2 329 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 PIH1D1Q9NWS0 290 aaKnown RBP8.5□□□□□ -1.05
YBX3-211ENST00000541351 TAS2R10Q9NYW0 307 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 SLC2A6Q9UGQ3 507 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 SH2B3Q9UQQ2 575 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 TCAF1Q9Y4C2 921 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 PMF1-BGLAPU3KQ54 211 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 TRRAPQ9Y4A5 3859 aa8.5□□□□□ -1.05
YBX3-211ENST00000541351 ESYT3A0FGR9 886 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 ERI3O43414 337 aaKnown RBP8.49□□□□□ -1.05
YBX3-211ENST00000541351 TNFRSF21O75509 655 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 CD8AP01732 235 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 IGKV3-11P04433 115 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 C8GP07360 202 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 NPPBP16860 134 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 RPL22P35268 128 aaKnown RBP8.49□□□□□ -1.05
YBX3-211ENST00000541351 NR4A2P43354 598 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms