RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SLC28A1O00337 649 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 CTIFO43310 598 aaKnown RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 IL3P08700 152 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 ARRB2P32121 409 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 DEKP35659 375 aaKnown RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 SOX3P41225 446 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 ST13P50502 369 aaKnown RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 ZNF267Q14586 743 aaPredicted RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 HEPACAMQ14CZ8 416 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 KIAA0040Q15053 153 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 EBPQ15125 230 aaKnown RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 CEBPEQ15744 281 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 IMPG1Q17R60 797 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 PRICKLE4Q2TBC4 344 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 UGT3A2Q3SY77 523 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 PIGGQ5H8A4 983 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 C16orf47Q6ZP98 133 aaPredicted RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 GALNTL5Q7Z4T8 443 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 SAMD14Q8IZD0 417 aaPredicted RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 FAM26EQ8N5C1 309 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 SLC15A4Q8N697 577 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 ZNF441Q8N8Z8 693 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 GOLM1Q8NBJ4 401 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 FAM98AQ8NCA5 519 aaKnown RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 OR7G1Q8NGA0 311 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 C16orf78Q8WTQ4 265 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 ASB15Q8WXK1 588 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 TMEM125Q96AQ2 219 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 CTHRC1Q96CG8 243 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 CNRIP1Q96F85 164 aaPredicted RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 SGCZQ96LD1 299 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 EBPLQ9BY08 206 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 WWTR1Q9GZV5 400 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 TUBB1Q9H4B7 451 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 MYNNQ9NPC7 610 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 KLHL1Q9NR64 748 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 UTS2RQ9UKP6 389 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 DNAJC15Q9Y5T4 150 aa12.14□□□□□ -0.47
LTBR-208ENST00000541005 A8MVJ9 347 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 WWP2O00308 870 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 BIRC5O15392 142 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ZNF354AO60765 605 aaPredicted RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 OR6B1O95007 311 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ZWINTO95229 277 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 NADKO95544 446 aaPredicted RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 CHEK2O96017 543 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ANXA4P09525 319 aaPredicted RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 CT62P0C5K7 136 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 MYZAPP0CAP1 466 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 DDCP20711 480 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 S1PR1P21453 382 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 MST1P26927 711 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 SSTR4P31391 388 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 PMP22Q01453 160 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 MGAT2Q10469 447 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 MAP4K2Q12851 820 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 UBAP2LQ14157 1087 aaKnown RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 MAPKAPK3Q16644 382 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ZNF750Q32MQ0 723 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 OPN5Q6U736 354 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 LYPD8Q6UX82 237 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 RTL4Q6ZR62 310 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ZCCHC23Q6ZST2 131 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 IKBIPQ70UQ0 350 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 SLC29A4Q7RTT9 530 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 SIAH3Q8IW03 269 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 DND1Q8IYX4 353 aaKnown RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 LRRC25Q8N386 305 aaPredicted RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 VWA5B2Q8N398 1253 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ZNF615Q8N8J6 731 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 POGLUT1Q8NBL1 392 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 C17orf47Q8NEP4 570 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 OR2T11Q8NH01 316 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 SLC22A8Q8TCC7 542 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ZNF675Q8TD23 568 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ERP27Q96DN0 273 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ZNF764Q96H86 408 aaPredicted RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 STMN4Q9H169 189 aaPredicted RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 LIN28AQ9H9Z2 209 aaKnown RBP12.13□□□□□ -0.47
LTBR-208ENST00000541005 TIMMDC1Q9NPL8 285 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 HPF1Q9NWY4 346 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 C1orf109Q9NX04 203 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 MAT2BQ9NZL9 334 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 ZNF639Q9UID6 485 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 TRAF6Q9Y4K3 522 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 PTGDR2Q9Y5Y4 395 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 CACNA1CQ13936 2221 aa12.13□□□□□ -0.47
LTBR-208ENST00000541005 PHF3Q92576 2039 aaKnown RBP12.12□□□□□ -0.47
LTBR-208ENST00000541005 TMEM233B4DJY2 109 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 RGS14O43566 566 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 ERAL1O75616 437 aaKnown RBP12.12□□□□□ -0.47
LTBR-208ENST00000541005 NT5EP21589 574 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 SOX18P35713 384 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
LTBR-208ENST00000541005 ALDH9A1P49189 494 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 DUSP2Q05923 314 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 BTKQ06187 659 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 ELOAQ14241 798 aaKnown RBP12.12□□□□□ -0.47
LTBR-208ENST00000541005 ZNF791Q3KP31 576 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms