RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 SPARCP09486 303 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CD59P13987 128 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CCNB1P14635 433 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PTPN3P26045 913 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TEAD1P28347 426 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 EPHA8P29322 1005 aaPredicted RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TRIM23P36406 574 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RXRGP48443 463 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ATP12AP54707 1039 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RWDD2BP57060 319 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PFN3P60673 137 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RPL26P61254 145 aaKnown RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RPS21P63220 83 aaKnown RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RAD51Q06609 339 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 NIPAL4Q0D2K0 466 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ELP6Q0PNE2 266 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 WASHC5Q12768 1159 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GRIK2Q13002 908 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MSLNQ13421 630 aaPredicted RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TFDP2Q14188 446 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PDK1Q15118 436 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SF3A2Q15428 464 aaKnown RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SIX1Q15475 284 aaPredicted RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 FCN2Q15485 313 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 UGP2Q16851 508 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TMEM30BQ3MIR4 351 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TEX44Q53QW1 395 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MARC1Q5VT66 337 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GGNBP1Q5YKI7 109 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SEL1L3Q68CR1 1132 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HIST2H2BDQ6DRA6 164 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 LEKR1Q6ZMV7 388 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GCNT7Q6ZNI0 430 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ASB18Q6ZVZ8 466 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 DPPA4Q7L190 304 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 BZW1Q7L1Q6 419 aaKnown RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CPLX4Q7Z7G2 160 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PRPF39Q86UA1 669 aaKnown RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CACUL1Q86Y37 369 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CCDC13Q8IYE1 715 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SYCE1Q8N0S2 351 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SLC22A18ASQ8N1D0 253 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TEX19Q8NA77 164 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 OR6K2Q8NGY2 324 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 KIAA1524Q8TCG1 905 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RMDN1Q96DB5 314 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SCRN2Q96FV2 425 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 IMP4Q96G21 291 aaKnown RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 BMFQ96LC9 184 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 NR1H4Q96RI1 486 aaPredicted RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 VAT1Q99536 393 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 LGMNQ99538 433 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 OMDQ99983 421 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 C19orf43Q9BQ61 176 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CALN1Q9BXU9 219 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 OSBPL8Q9BZF1 889 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 POLR1EQ9GZS1 481 aaKnown RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CARD9Q9H257 536 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ATP13A3Q9H7F0 1226 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 NFKBIL1Q9UBC1 381 aaPredicted RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ZNF69Q9UC07 566 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RPL26L1Q9UNX3 145 aaKnown RBP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 NCKAP1Q9Y2A7 1128 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 DLGAP4Q9Y2H0 992 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PPP2R2CQ9Y2T4 447 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 LOXL2Q9Y4K0 774 aa3.83□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SNRNP200O75643 2136 aaKnown RBP3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 A0A0J9YYE9 177 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SPTY2D1-AS1A0A0U1RR47 76 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 A0A1B0GTQ1 180 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 LOC285095A0A1B0GVY8 99 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 A0A1W2PQM1 296 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MACROD2A1Z1Q3 448 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CTAGE9A4FU28 777 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TMEM110-MUSTN1A8MSY1 372 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MEI4A8MW99 385 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PRAMEF26H0Y7S4 382 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 KCNK1O00180 336 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TLR4O00206 839 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 YKT6O15498 198 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TNFSF14O43557 240 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 DFNA5O60443 496 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ZNF189O75820 626 aaPredicted RBP3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SEC31AO94979 1220 aaKnown RBP3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SOD1P00441 154 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 EPOP01588 193 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TRBC1P01850 177 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PRSS1P07477 247 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HOXC4P09017 264 aaPredicted RBP3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CCDC175P0C221 793 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CTAGE8P0CG41 777 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GIMD1P0DJR0 217 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GNSP15586 552 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ZNF30P17039 623 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CSRP1P21291 193 aaKnown RBP3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HNRNPA2B1P22626 353 aaKnown RBP3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 LHCGRP22888 699 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PSMA3P25788 255 aa3.82□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ADRA1AP35348 466 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms