RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SNX15Q9NRS6 342 aa11.02□□□□□ -0.65
CBX3P4-202ENST00000540428 ASB4Q9Y574 426 aa11.02□□□□□ -0.65
CBX3P4-202ENST00000540428 C15orf38-AP3S2A0A0A6YYH1 394 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 C2orf92A0A1B0GVN3 265 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 GOSR1O95249 250 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 IL2RAP01589 272 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 HPNP05981 417 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 NR2F6P10588 404 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 MTHFD2P13995 350 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 FOSL1P15407 271 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 KLK2P20151 261 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 BMP5P22003 454 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 BSGP35613 385 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 GPX6P59796 221 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 GNG11P61952 73 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 RPS13P62277 151 aaKnown RBP11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 RPP38P78345 283 aaKnown RBP11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 DLG1Q12959 904 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 NAB1Q13506 487 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 SETDB1Q15047 1291 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 CEBPEQ15744 281 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 NHSL2Q5HYW2 709 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 NSUN5P2Q63ZY6 315 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 POMZP3Q6PJE2 187 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 CMC1Q7Z7K0 106 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 CDC20BQ86Y33 519 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 RNF175Q8N4F7 328 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 TEX9Q8N6V9 391 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 NAXEQ8NCW5 288 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 TNIP2Q8NFZ5 429 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 SPPL2AQ8TCT8 520 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 DIO2Q92813 273 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 MTERF1Q99551 399 aaKnown RBP11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 UBQLN3Q9H347 655 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 LIME1Q9H400 295 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 ACTR8Q9H981 624 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 ANGPTL3Q9Y5C1 460 aa11.01□□□□□ -0.65
CBX3P4-202ENST00000540428 PRRC2AP48634 2157 aaKnown RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 ANKHD1Q8IWZ3 2542 aaKnown RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 ITPR3Q14573 2671 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 A0A1W2PR48 441 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 CD8B2A6NJW9 211 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 FOXE1O00358 373 aaPredicted RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 TMPRSS11DO60235 418 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 CDH16O75309 829 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 EEDO75530 441 aaKnown RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 PRKRAO75569 313 aaKnown RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 FAM155BO75949 473 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 FAM58BPP0C7Q3 252 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 HOXB4P17483 251 aaPredicted RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 STX2P32856 288 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 GMPRP36959 345 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 TRPC1P48995 793 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 CDK9P50750 372 aaKnown RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 NRG3P56975 720 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 SORDQ00796 357 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 FUT7Q11130 342 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 SNTB1Q13884 538 aaKnown RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 SLMAPQ14BN4 828 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 KBTBD12Q3ZCT8 623 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 HLA-DQA1Q5Y7H0 255 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 VASNQ6EMK4 673 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 OR52E8Q6IFG1 317 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 METTL2BQ6P1Q9 378 aaKnown RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 CYP20A1Q6UW02 462 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 NUDT13Q86X67 352 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 KIF18BQ86Y91 864 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 MYLK4Q86YV6 388 aaPredicted RBP11□□□□□ -0.65
CBX3P4-202ENST00000540428 GALNT12Q8IXK2 581 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 PPM1NQ8N819 430 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 C17orf47Q8NEP4 570 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 NXNL1Q96CM4 212 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 NTNG2Q96CW9 530 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 ANGPTL4Q9BY76 406 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 KCNF1Q9H3M0 494 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 CXorf21Q9HAI6 301 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 DLL4Q9NR61 685 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 FETUBQ9UGM5 382 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 CBLCQ9ULV8 474 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 C15orf41Q9Y2V0 281 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 ACOT9Q9Y305 439 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 NPFFR2Q9Y5X5 522 aa11□□□□□ -0.65
CBX3P4-202ENST00000540428 A0A087X1B8 175 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 MBD3L4A6NDZ8 208 aaPredicted RBP10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 MBD3L3A6NE82 208 aaPredicted RBP10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 MBD3L5A6NJ08 208 aaPredicted RBP10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 TRAPPC6AO75865 159 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 SEMA3DO95025 777 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 LRATO95237 230 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 AIFM1O95831 613 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 IL18BPO95998 194 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 EPXP11678 715 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 PIK3CGP48736 1102 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 MASP1P48740 699 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 ZNF136P52737 540 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 DGKQP52824 942 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 ALDH18A1P54886 795 aaKnown RBP10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 FOXD4Q12950 439 aaPredicted RBP10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 PCBP2Q15366 365 aaKnown RBP eCLIP10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 FAM83EQ2M2I3 478 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms