RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 KIAA1671Q9BY89 1806 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 HTR3EA5X5Y0 456 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 OTOL1A6NHN0 477 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 DLGAP1O14490 977 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 CAPN5O15484 640 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 SLC35G6P0C7Q6 338 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF155Q12901 538 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 SP140Q13342 867 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 SHFQ7M4L6 423 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 KIAA0907Q7Z7F0 614 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 RANBP3LQ86VV4 465 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 GALNT13Q8IUC8 556 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 CCDC116Q8IYX3 515 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 RASGEF1AQ8N9B8 481 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 HMGCLL1Q8TB92 370 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 DOK4Q8TEW6 326 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 ASB11Q8WXH4 323 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 RBM18Q96H35 190 aaKnown RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 P2RY13Q9BPV8 354 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 RACGAP1Q9H0H5 632 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 TP63Q9H3D4 680 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 PFDN2Q9UHV9 154 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 HCN2Q9UL51 889 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 CMAHPQ9Y471 501 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 AGAP14A8MT82 685 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 SMAD9O15198 467 aaKnown RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 KDM4BO94953 1096 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 RPP14O95059 124 aaKnown RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 IL3P08700 152 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 IGFBP4P22692 258 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 TCEA1P23193 301 aaKnown RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 GJA4P35212 333 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 LRRC32Q14392 662 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 BTBD16Q32M84 506 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 DESI1Q6ICB0 168 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 Q6ZSR9 355 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 PRSS48Q7RTY5 328 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 GPR149Q86SP6 731 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 AMIGO1Q86WK6 493 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 SFTPA1Q8IWL2 248 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 NRSN1Q8IZ57 195 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 NEIL3Q8TAT5 605 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 DTD2Q96FN9 168 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 CDCA3Q99618 268 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 GPN1Q9HCN4 374 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 BRD7Q9NPI1 651 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 NLKQ9UBE8 527 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 TMPRSS11EQ9UL52 423 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 MKL2Q9ULH7 1088 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 RASGRP1O95267 797 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 OR12D1P0DN82 309 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CCR8P51685 355 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CRISP1P54107 249 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 MAZP56270 477 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ODF4Q2M2E3 257 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 HUS1BQ8NHY5 278 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 SLC5A11Q8WWX8 675 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 GATAD2BQ8WXI9 593 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 LRR1Q96L50 414 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 TEX37Q96LM6 180 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF354BQ96LW1 612 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ENAMQ9NRM1 1142 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 PCDHGB6Q9Y5F9 930 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 IGLV3-16A0A075B6K0 115 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 HOXD12P35452 270 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 FAUP35544 74 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 KHKP50053 298 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CLCN2P51788 898 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 XKR7Q5GH72 579 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF551Q7Z340 670 aaPredicted RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 PHC2Q8IXK0 858 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ETFBKMTQ8IXQ9 262 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 PRSS58Q8IYP2 241 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 Q8N402 240 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CHST4Q8NCG5 386 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 TMIEQ8NEW7 156 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 TSEN15Q8WW01 171 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 RGMAQ96B86 450 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 KCNK12Q9HB15 430 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 MRPS30Q9NP92 439 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 DCAF13Q9NV06 445 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ENPP5Q9UJA9 477 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ZFR2Q9UPR6 939 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 BAIAP2Q9UQB8 552 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 KCNK6Q9Y257 313 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 TMEM202A6NGA9 273 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF701M0R085 212 aaPredicted RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 NDUFS4O43181 175 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 SLC16A8O95907 504 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CAPNS1P04632 268 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 HMGN1P05114 100 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 SSTR4P31391 388 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 GABARAPL2P60520 117 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF181Q2M3W8 571 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 MINDY4Q4G0A6 757 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 VITQ6UXI7 678 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 PRR23CQ6ZRP0 262 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 GJD3Q8N144 294 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 SAMD12Q8N8I0 201 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms